Miyakogusa Predicted Gene
- Lj1g3v1452960.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj1g3v1452960.1 tr|B8XJY5|B8XJY5_SOYBN Inducer of CBF expression
1 OS=Glycine max GN=ICE1 PE=2 SV=1,64.66,0,seg,NULL; helix loop helix
domain,Helix-loop-helix domain; coiled-coil,NULL; HLH,
helix-loop-helix D,CUFF.27335.1
(1479 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC74852 similar to UniRef100_A7PHQ4 Cluster: Chromosome... 1096 0.0
gnl|LJGI|TC78898 similar to UniRef100_A7PA22 Cluster: Chromosome... 642 0.0
gnl|LJGI|TC70433 homologue to UniRef100_Q2HUL6 Cluster: Helix-lo... 84 3e-15
>gnl|LJGI|TC74852 similar to UniRef100_A7PHQ4 Cluster: Chromosome chr17 scaffold_16,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr17 scaffold_16, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (6%)
Length = 781
Score = 1096 bits (553), Expect = 0.0
Identities = 553/553 (100%)
Strand = Plus / Plus
Query: 1 atgttgtccagaataaacaacggttcctggatggatgaaagagaggatgaaaactctgct 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 229 atgttgtccagaataaacaacggttcctggatggatgaaagagaggatgaaaactctgct 288
Query: 61 tctgcttcttgggccagaaactccaagccaaactccactggttttgttgaaaacagagat 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 289 tctgcttcttgggccagaaactccaagccaaactccactggttttgttgaaaacagagat 348
Query: 121 gatttgggttctctctgtgctttgaaacccatgcttgaagtggatgaggaatggttcatg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 349 gatttgggttctctctgtgctttgaaacccatgcttgaagtggatgaggaatggttcatg 408
Query: 181 atgagggacatggcttttgacaacgttttgctccaaaccgtggactctcactctgcatct 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 409 atgagggacatggcttttgacaacgttttgctccaaaccgtggactctcactctgcatct 468
Query: 241 tcatgttctccatcttcctctgttttcaacacacttgaaccttcatcatcgcagtatttt 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 469 tcatgttctccatcttcctctgttttcaacacacttgaaccttcatcatcgcagtatttt 528
Query: 301 ctgcctccgaatcccaaaccacccactttatcttctcttctcaacccttttgacatgggg 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 529 ctgcctccgaatcccaaaccacccactttatcttctcttctcaacccttttgacatgggg 588
Query: 361 tttcttgatcctcaaggttccaccacttcttctcttctgggtagcttcgttgagctgaac 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 589 tttcttgatcctcaaggttccaccacttcttctcttctgggtagcttcgttgagctgaac 648
Query: 421 aactcaaaaccccagttaacacttcctaacttcacctcaggcactaccatgaccatgccc 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 649 aactcaaaaccccagttaacacttcctaacttcacctcaggcactaccatgaccatgccc 708
Query: 481 catttgccacaaagcaacacttcctttggaggatttcagaacttggaagaagcttctgga 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 709 catttgccacaaagcaacacttcctttggaggatttcagaacttggaagaagcttctgga 768
Query: 541 aagactccatttc 553
|||||||||||||
Sbjct: 769 aagactccatttc 781
>gnl|LJGI|TC78898 similar to UniRef100_A7PA22 Cluster: Chromosome chr14 scaffold_9,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr14 scaffold_9, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (20%)
Length = 491
Score = 642 bits (324), Expect = 0.0
Identities = 327/328 (99%)
Strand = Plus / Plus
Query: 1152 agcacttcctggccgtattaaagaagaactgtgccccagctcattgccaagccccaatgg 1211
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 agcacttcctggccgtattaaagaagaactgtgccccagctcattgccaagccccaatgg 60
Query: 1212 ccaacctgccagggttgaggttcggttgcgtgaaggaagagctgtgaatatccacatgtt 1271
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 ccaacctgccagggttgaggttcggttgcgtgaaggaagagctgtgaatatccacatgtt 120
Query: 1272 ttgtgcccgcaaacccggtttgttgctctcaaccatgagggctttggataatcttggttt 1331
||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 121 ttgtgcccgcaaacccggtttgttgctttcaaccatgagggctttggataatcttggttt 180
Query: 1332 ggacattcagcaagctgttatcagctgtttcaatggatttgctatggatgtttttcgagc 1391
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 ggacattcagcaagctgttatcagctgtttcaatggatttgctatggatgtttttcgagc 240
Query: 1392 tgagcaatgcaacgaaggtcaggaagtccatccggagcacatcaaagcaatactattgga 1451
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 tgagcaatgcaacgaaggtcaggaagtccatccggagcacatcaaagcaatactattgga 300
Query: 1452 gtcagctggcttccatggcttgatctaa 1479
||||||||||||||||||||||||||||
Sbjct: 301 gtcagctggcttccatggcttgatctaa 328
>gnl|LJGI|TC70433 homologue to UniRef100_Q2HUL6 Cluster: Helix-loop-helix DNA-binding;
n=1; Medicago truncatula|Rep: Helix-loop-helix
DNA-binding - Medicago truncatula (Barrel medic), partial
(23%)
Length = 599
Score = 83.8 bits (42), Expect = 3e-15
Identities = 159/198 (80%)
Strand = Plus / Plus
Query: 1243 gaaggaagagctgtgaatatccacatgttttgtgcccgcaaacccggtttgttgctctca 1302
||||| |||||||| || || || ||||||||| |||||| ||| ||| | ||||| ||
Sbjct: 107 gaagggagagctgtcaacattcatatgttttgtacccgcagaccaggtcttttgctttct 166
Query: 1303 accatgagggctttggataatcttggtttggacattcagcaagctgttatcagctgtttc 1362
|| |||| ||| ||||| || || || ||||| ||||||| |||||||| ||||| ||
Sbjct: 167 actatgaaggcgttggacaacctcggattggatgttcagcaggctgttattagctgcttt 226
Query: 1363 aatggatttgctatggatgtttttcgagctgagcaatgcaacgaaggtcaggaagtccat 1422
||||| |||||| | ||||| || ||||||||||||||| ||||| ||||| ||||
Sbjct: 227 aatggctttgctttagatgtgttcagagctgagcaatgcacagaaggccaggatgtcctc 286
Query: 1423 ccggagcacatcaaagca 1440
|| ||||| |||||||||
Sbjct: 287 cctgagcaaatcaaagca 304