Miyakogusa Predicted Gene
- Lj1g3v1452940.2
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj1g3v1452940.2 Non Chatacterized Hit- tr|I1JXQ2|I1JXQ2_SOYBN
Uncharacterized protein OS=Glycine max PE=4 SV=1,93.87,0,FAMILY NOT
NAMED,NULL; Auxin_resp,Auxin response factor; B3,B3 DNA binding
domain; no description,DN,CUFF.27337.2
(1116 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC66053 homologue to UniRef100_A7PHQ5 Cluster: Chromoso... 1316 0.0
gnl|LJGI|TC75773 similar to UniRef100_Q56YP4 Cluster: ARF1-bindi... 329 2e-89
gnl|LJGI|TC82651 similar to UniRef100_A7PHQ5 Cluster: Chromosome... 266 3e-70
gnl|LJGI|TC72914 similar to UniRef100_Q56YP4 Cluster: ARF1-bindi... 117 2e-25
gnl|LJGI|BP033179 similar to UniRef100_A7PHQ5 Cluster: Chromosom... 78 1e-13
>gnl|LJGI|TC66053 homologue to UniRef100_A7PHQ5 Cluster: Chromosome chr17 scaffold_16,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr17 scaffold_16, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (31%)
Length = 1177
Score = 1316 bits (664), Expect = 0.0
Identities = 667/668 (99%)
Strand = Plus / Plus
Query: 1 atgccggtttacgatctcccatctaagatcctatgccgggtcatcaacgtgcagctgaag 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 510 atgccggtttacgatctcccatctaagatcctatgccgggtcatcaacgtgcagctgaag 569
Query: 61 gcggagccggatacggatgaggtgtttgctcaggtgaccttacttcctgagccaaatcaa 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 570 gcggagccggatacggatgaggtgtttgctcaggtgaccttacttcctgagccaaatcaa 629
Query: 121 gatgagaatgccgtggagaaggagcctccgccaccgccgccgccacgatttcatgtgcat 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 630 gatgagaatgccgtggagaaggagcctccgccaccgccgccgccacgatttcatgtgcat 689
Query: 181 tctttctgtaaaaccttgacggcctccgataccagcacccatggtgggttttccgtgctg 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 690 tctttctgtaaaaccttgacggcctccgataccagcacccatggtgggttttccgtgctg 749
Query: 241 agacgacatgctgatgagtgccttcctccactggacatgtcaaagcagccaccaacccag 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 750 agacgacatgctgatgagtgccttcctccactggacatgtcaaagcagccaccaacccag 809
Query: 301 gaattggcggctaaggatttgcatgggaatgaatggcgatttagacacatctttcgcggt 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 810 gaattggcggctaaggatttgcatgggaatgaatggcgatttagacacatctttcgcggt 869
Query: 361 caaccccgtagacacttacttcagagtggttggagtgtttttgtgagctccaaaaggctt 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 870 caaccccgtagacacttacttcagagtggttggagtgtttttgtgagctccaaaaggctt 929
Query: 421 gtcgctggggatgcatttatttttctaagaggtgagaatggggaacttcgtgttggtgta 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 930 gtcgctggggatgcatttatttttctaagaggtgagaatggggaacttcgtgttggtgta 989
Query: 481 aggcgagcaatgagacagcagggcaatgttccaccatcagttatctctagccacagcatg 540
|||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 990 aggcgagcaatgagacagcaaggcaatgttccaccatcagttatctctagccacagcatg 1049
Query: 541 catcttggggtccttgcaactgcttggcatgctatcttgacgggaactatattcactgtt 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1050 catcttggggtccttgcaactgcttggcatgctatcttgacgggaactatattcactgtt 1109
Query: 601 tattacaagcccaggaccagtcctgctgagttcattgttccatatgatcaatatatggag 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1110 tattacaagcccaggaccagtcctgctgagttcattgttccatatgatcaatatatggag 1169
Query: 661 tctctcaa 668
||||||||
Sbjct: 1170 tctctcaa 1177
>gnl|LJGI|TC75773 similar to UniRef100_Q56YP4 Cluster: ARF1-binding protein; n=1;
Arabidopsis thaliana|Rep: ARF1-binding protein -
Arabidopsis thaliana (Mouse-ear cress), partial (18%)
Length = 587
Score = 329 bits (166), Expect = 2e-89
Identities = 375/442 (84%), Gaps = 2/442 (0%)
Strand = Plus / Plus
Query: 223 ggtgggttttccgtgctgagacgacatgctgatgagtgccttcctccactggacatgtca 282
||||||||||| ||||||||||||||||||||||| ||||| ||||| |||||||||||
Sbjct: 74 ggtgggttttcagtgctgagacgacatgctgatgaatgcctccctccgctggacatgtcc 133
Query: 283 aagcagccaccaacccaggaattggcggctaaggatttgcatgggaatgaatggcgattt 342
|| |||||||| ||||||| ||||| || ||||| | ||||||| || ||||||||
Sbjct: 134 aaacagccacctacccaggcattggtagccaaggacctccatgggagcgagtggcgattc 193
Query: 343 agacacatctttcgcggtcaaccccgtagacacttacttcagagtggttggagtgttttt 402
|| || ||||||| ||||||||| |||||||||||| | | || |||||||||||||||
Sbjct: 194 aggcatatctttctcggtcaaccacgtagacacttattgctaagcggttggagtgttttt 253
Query: 403 gtgagctccaaaaggcttgtcgctggggatgcatttatttttctaagaggtgagaatggg 462
|| ||||| || ||||| || |||||||||||||||||||| ||||||||||||||||||
Sbjct: 254 gtcagctctaagaggctagttgctggggatgcatttattttcctaagaggtgagaatggg 313
Query: 463 gaacttcgtgttggtgtaaggcgagcaatgagacagcagggcaatgttccaccatcagtt 522
|||||||| || ||||| ||||| || |||||||||||||| |||||| || | ||||||
Sbjct: 314 gaacttcgagtgggtgtcaggcgtgccatgagacagcagggtaatgtttcatcttcagtt 373
Query: 523 atctctagccacagcatgcatcttggggtccttgcaactgcttggcatgctatcttgacg 582
||||| |||| |||| ||||||| || |||||||| | |||||||||||| | ||||||
Sbjct: 374 atctcaagccccagcctgcatctcggtgtccttgccagtgcttggcatgccaacttgacc 433
Query: 583 ggaactatattcactgtttattacaagcccaggaccagtcct-gctg-agttcattgttc 640
|| | || || |||||||||||| | || ||||||||||| |||| | || |||||||
Sbjct: 434 gggagcatgtttactgtttattactaacctaggaccagtcccagctgcaatttattgttc 493
Query: 641 catatgatcaatatatggagtc 662
| ||||||||||| ||||||||
Sbjct: 494 cttatgatcaatacatggagtc 515
>gnl|LJGI|TC82651 similar to UniRef100_A7PHQ5 Cluster: Chromosome chr17 scaffold_16,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr17 scaffold_16, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (18%)
Length = 757
Score = 266 bits (134), Expect = 3e-70
Identities = 134/134 (100%)
Strand = Plus / Plus
Query: 944 ttctttcatcgccagattcttctgttcttactcgagaagcttcgtcaaaagtaagtgtag 1003
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 ttctttcatcgccagattcttctgttcttactcgagaagcttcgtcaaaagtaagtgtag 60
Query: 1004 accctttacctgcaaatgggtttccaagggtcttgcaaggtcaagaattctcgaccttga 1063
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 accctttacctgcaaatgggtttccaagggtcttgcaaggtcaagaattctcgaccttga 120
Query: 1064 gaggcaatattgca 1077
||||||||||||||
Sbjct: 121 gaggcaatattgca 134
>gnl|LJGI|TC72914 similar to UniRef100_Q56YP4 Cluster: ARF1-binding protein; n=1;
Arabidopsis thaliana|Rep: ARF1-binding protein -
Arabidopsis thaliana (Mouse-ear cress), partial (11%)
Length = 586
Score = 117 bits (59), Expect = 2e-25
Identities = 95/107 (88%)
Strand = Plus / Plus
Query: 1 atgccggtttacgatctcccatctaagatcctatgccgggtcatcaacgtgcagctgaag 60
||||| ||||||||||||||| | |||||| | || ||||||||||||||| ||| |||
Sbjct: 478 atgcctgtttacgatctcccacccaagatcttgtgtcgggtcatcaacgtgatgctcaag 537
Query: 61 gcggagccggatacggatgaggtgtttgctcaggtgaccttacttcc 107
|||||||| || || ||||||||||||||||||||||||||||||||
Sbjct: 538 gcggagccagacacagatgaggtgtttgctcaggtgaccttacttcc 584
>gnl|LJGI|BP033179 similar to UniRef100_A7PHQ5 Cluster: Chromosome chr17 scaffold_16,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr17 scaffold_16, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (10%)
Length = 528
Score = 77.8 bits (39), Expect = 1e-13
Identities = 66/75 (88%)
Strand = Plus / Plus
Query: 1002 agaccctttacctgcaaatgggtttccaagggtcttgcaaggtcaagaattctcgacctt 1061
||||||||| || || | |||||| ||||||||||||||||||||||||| ||||||||
Sbjct: 14 agaccctttgcccgccagtgggttcccaagggtcttgcaaggtcaagaatcatcgacctt 73
Query: 1062 gagaggcaatattgc 1076
|||||| ||| ||||
Sbjct: 74 gagaggtaattttgc 88