Miyakogusa Predicted Gene

Lj1g3v1442480.1

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj1g3v1442480.1 tr|A9RJN2|A9RJN2_PHYPA Predicted protein
OS=Physcomitrella patens subsp. patens
GN=PHYPADRAFT_159473,23.89,8e-19,DUF793,Protein BYPASS-related;
SUBFAMILY NOT NAMED,NULL; FAMILY NOT NAMED,NULL;
seg,NULL,NODE_924_length_1510_cov_234.939072.path2.1
         (892 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|TC70871 similar to UniRef100_A7Q7B0 Cluster: Chromosome...   660   0.0  
gnl|LJGI|TC76745 similar to UniRef100_A7Q7B0 Cluster: Chromosome...   127   1e-28
gnl|LJGI|FS320394 similar to UniRef100_A7Q7B0 Cluster: Chromosom...   111   8e-24
gnl|LJGI|TC69621 similar to UniRef100_A7Q7B0 Cluster: Chromosome...    92   7e-18
gnl|LJGI|TC58881 weakly similar to UniRef100_Q8RM91 Cluster: Tra...    60   2e-08

>gnl|LJGI|TC70871 similar to UniRef100_A7Q7B0 Cluster: Chromosome chr18 scaffold_59,
           whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
           Chromosome chr18 scaffold_59, whole genome shotgun
           sequence - Vitis vinifera (Grape), partial (28%)
          Length = 765

 Score =  660 bits (333), Expect = 0.0
 Identities = 343/345 (99%), Gaps = 1/345 (0%)
 Strand = Plus / Plus

                                                                       
Query: 549 gaattacac-atgggctgttccattgctctctcttcatgagaggatcttcgaggagtcga 607
           ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2   gaattacacnatgggctgttccattgctctctcttcatgagaggatcttcgaggagtcga 61

                                                                       
Query: 608 agaagcgggagcggaagaatgcttgtggtttgctcaaggagatttatcagattgagaaat 667
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 62  agaagcgggagcggaagaatgcttgtggtttgctcaaggagatttatcagattgagaaat 121

                                                                       
Query: 668 gtgctagggccatgaatgaattggctgattctgtgcagttcccattgacagaggagaggg 727
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 122 gtgctagggccatgaatgaattggctgattctgtgcagttcccattgacagaggagaggg 181

                                                                       
Query: 728 aaggggaagttaggaagagagtgcaggaggtttcacaagtttgtgatgctttgaaggatg 787
           |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 182 aaggggaatttaggaagagagtgcaggaggtttcacaagtttgtgatgctttgaaggatg 241

                                                                       
Query: 788 gacttgatcctctggagcgccaagtgcgggaggttttccatagaattgttcgcagccgaa 847
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 242 gacttgatcctctggagcgccaagtgcgggaggttttccatagaattgttcgcagccgaa 301

                                                        
Query: 848 cggaagggcttgactctcttggaaggccaaacaatgctgagtaaa 892
           |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 302 cggaagggcttgactctcttggaaggccaaacaatgctgagtaaa 346


>gnl|LJGI|TC76745 similar to UniRef100_A7Q7B0 Cluster: Chromosome chr18 scaffold_59,
           whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
           Chromosome chr18 scaffold_59, whole genome shotgun
           sequence - Vitis vinifera (Grape), partial (43%)
          Length = 633

 Score =  127 bits (64), Expect = 1e-28
 Identities = 173/207 (83%), Gaps = 3/207 (1%)
 Strand = Plus / Plus

                                                                       
Query: 16  ttcgaacggagtgtcaaggctttggatgtttgtaatgcaattcgtgatgggattgagcag 75
           ||||| |||||||| ||||| |||||||||||||| ||||| ||||||||||||||||||
Sbjct: 190 ttcgagcggagtgtgaaggcgttggatgtttgtaacgcaatccgtgatgggattgagcag 249

                                                                       
Query: 76  attcgtcaatggcagaagctcttagagattgtgctctttgcattaggggggaatcagaga 135
           ||| | |||||| |||||||||| |||||||| || | ||| || |    |||  | |||
Sbjct: 250 attaggcaatggaagaagctcttggagattgttctatgtgctttggatcagaa--aaaga 307

                                                                       
Query: 136 agcattggtgagggtcaatttcgtagagcgaagaaggctctcattgatttggcaattggg 195
           | |||||||||||||||||||||  | || || ||||||||  ||||||| || ||||||
Sbjct: 308 a-cattggtgagggtcaatttcgccgggccaaaaaggctcttgttgatttagctattggg 366

                                      
Query: 196 atgcttgatgataaggattccaatgct 222
           ||||| ||||| |||||||| ||||||
Sbjct: 367 atgctagatgacaaggattctaatgct 393



 Score = 63.9 bits (32), Expect = 2e-09
 Identities = 62/72 (86%)
 Strand = Plus / Plus

                                                                       
Query: 322 tttcggtcactttcatggagtgtttctcgtacttggtctgctgcaagacagctccaagca 381
           ||||| || |||||||||||||| || || | |||||||||||| || || || ||||||
Sbjct: 505 tttcgatcgctttcatggagtgtctcgcggaattggtctgctgcgaggcaactacaagca 564

                       
Query: 382 attgggaacaac 393
           ||||||||||||
Sbjct: 565 attgggaacaac 576


>gnl|LJGI|FS320394 similar to UniRef100_A7Q7B0 Cluster: Chromosome chr18 scaffold_59,
           whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
           Chromosome chr18 scaffold_59, whole genome shotgun
           sequence - Vitis vinifera (Grape), partial (28%)
          Length = 776

 Score =  111 bits (56), Expect = 8e-24
 Identities = 83/92 (90%)
 Strand = Plus / Plus

                                                                       
Query: 16  ttcgaacggagtgtcaaggctttggatgtttgtaatgcaattcgtgatgggattgagcag 75
           ||||| |||||||| ||||| |||||||||||||| ||||| ||||||||||||||||||
Sbjct: 628 ttcgagcggagtgtgaaggcgttggatgtttgtaacgcaatccgtgatgggattgagcag 687

                                           
Query: 76  attcgtcaatggcagaagctcttagagattgt 107
           ||| | |||||| |||||||||| ||||||||
Sbjct: 688 attaggcaatggaagaagctcttggagattgt 719


>gnl|LJGI|TC69621 similar to UniRef100_A7Q7B0 Cluster: Chromosome chr18 scaffold_59,
           whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
           Chromosome chr18 scaffold_59, whole genome shotgun
           sequence - Vitis vinifera (Grape), partial (32%)
          Length = 642

 Score = 91.7 bits (46), Expect = 7e-18
 Identities = 130/158 (82%)
 Strand = Plus / Plus

                                                                       
Query: 598 gaggagtcgaagaagcgggagcggaagaatgcttgtggtttgctcaaggagatttatcag 657
           |||||||||| |||| ||||| |||||||| |||||||  || | | ||||||| | |||
Sbjct: 97  gaggagtcgaggaagagggagaggaagaattcttgtgggctgatgagggagattcagcag 156

                                                                       
Query: 658 attgagaaatgtgctagggccatgaatgaattggctgattctgtgcagttcccattgaca 717
           |||||||| ||||||||||| |||||||| ||||  |||||||||||||| || ||||  
Sbjct: 157 attgagaagtgtgctagggcgatgaatgagttgggggattctgtgcagtttcctttgagt 216

                                                 
Query: 718 gaggagagggaaggggaagttaggaagagagtgcagga 755
           ||| |||  || | ||| |||||| | |||||||||||
Sbjct: 217 gagaagaaagaggaggaggttaggcatagagtgcagga 254


>gnl|LJGI|TC58881 weakly similar to UniRef100_Q8RM91 Cluster: Transposase; n=2;
           Mycoplasma mycoides subsp. mycoides SC|Rep: Transposase
           - Mycoplasma mycoides subsp. mycoides SC, partial (4%)
          Length = 798

 Score = 60.0 bits (30), Expect = 2e-08
 Identities = 30/30 (100%)
 Strand = Plus / Plus

                                         
Query: 1   atggtcgctgactatttcgaacggagtgtc 30
           ||||||||||||||||||||||||||||||
Sbjct: 769 atggtcgctgactatttcgaacggagtgtc 798