Miyakogusa Predicted Gene
- Lj1g3v1421330.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj1g3v1421330.1 tr|G7J3A0|G7J3A0_MEDTR Mei2-like protein
OS=Medicago truncatula GN=MTR_3g098620 PE=4 SV=1,79.66,0,seg,NULL; RNA
recognition motif,RNA recognition motif domain; RRM_2,RNA recognition
motif 2; RRM_1,R,CUFF.27339.1
(2844 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC79701 similar to UniRef100_A7PHR4 Cluster: Chromosome... 1780 0.0
gnl|LJGI|AV765211 weakly similar to UniRef100_Q6J732 Cluster: AM... 785 0.0
gnl|LJGI|TC60430 similar to UniRef100_A7PHR4 Cluster: Chromosome... 478 e-133
>gnl|LJGI|TC79701 similar to UniRef100_A7PHR4 Cluster: Chromosome chr17 scaffold_16,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr17 scaffold_16, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (14%)
Length = 1083
Score = 1780 bits (898), Expect = 0.0
Identities = 917/921 (99%), Gaps = 3/921 (0%)
Strand = Plus / Plus
Query: 1 atgccttctgaaattatggaccagaggggtgtaactgcctcg-tctcacatgttcgacga 59
|||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 165 atgccttctgaaattatggaccagaggggtgtaactgcctcgatctcacatgttcgacga 224
Query: 60 tgtttcctatgctgctgagaggaatgttggtttgcggaagccaaaatccattcatgacca 119
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 225 tgtttcctatgctgctgagaggaatgttggtttgcggaagccaaaatccattcatgacca 284
Query: 120 ttatccacaaggaaggagtgaaatggcagcattgcctggcagtattttgaatgctccatc 179
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 285 ttatccacaaggaaggagtgaaatggcagcattgcctggcagtattttgaatgctccatc 344
Query: 180 acccctcgaaacaaaagcagaagcaggcttgccgatgacacagactagtcggtctggtga 239
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 345 acccctcgaaacaaaagcagaagcaggcttgccgatgacacagactagtcggtctggtga 404
Query: 240 aatatcacaaaatctacattttggtagagaagctggcattatggatgtgctgaaggattc 299
||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 405 aatatcacaaaatctacatttaggtagagaagctggcattatggatgtgctgaaggattc 464
Query: 300 caaggaatctatgaattatcatgcaagatcgtttgatgtgcgtaggcagccggcgtctag 359
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 465 caaggaatctatgaattatcatgcaagatcgtttgatgtgcgtaggcagccggcgtctag 524
Query: 360 ctcatatggtttaattggaaacaagattgtcaccaatgctggctcacgtgaaagcagtct 419
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 525 ctcatatggtttaattggaaacaagattgtcaccaatgctggctcacgtgaaagcagtct 584
Query: 420 attctcaagttcactttctgacatatttagccagaagttgcggttaatggggaatggtgt 479
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 585 attctcaagttcactttctgacatatttagccagaagttgcggttaatggggaatggtgt 644
Query: 480 tctgtctgatcagcacattactgtcggttccctgcctgaggaagaaccatttaaatctct 539
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 645 tctgtctgatcagcacattactgtcggttccctgcctgaggaagaaccatttaaatctct 704
Query: 540 tgaagaaattgaggctgacactatagggaatctccttcctgatgaagctgatctgttttc 599
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 705 tgaagaaattgaggctgacactatagggaatctccttcctgatgaagctgatctgttttc 764
Query: 600 tggtgtcactgatgactggggaagcagtgctcatgctagaacaactgatgactttgaaga 659
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 765 tggtgtcactgatgactggggaagcagtgctcatgctagaacaactgatgactttgaaga 824
Query: 660 ttttgatttgttcagcagtggtggaggcatggagttggaaggagatgagcatctagtttc 719
||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 825 ttttgatttgttcagcagt--tggaggcatggagttggaaggagatgagcatctagtttc 882
Query: 720 aggaaaaagaaccagttacgtggacggagatcctggttactttggggcttctaaaggaaa 779
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 883 aggaaaaagaaccagttacgtggacggagatcctggttactttggggcttctaaaggaaa 942
Query: 780 aaatccttttggtgaacaatattcgagaacactttttgttagaaacatcaatagcaatgt 839
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 943 aaatccttttggtgaacaatattcgagaacactttttgttagaaacatcaatagcaatgt 1002
Query: 840 agaagactctgagctaaaggctctctttgagctatatggagacattcgaaccatttatac 899
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1003 agaagactctgagctaaaggctctctttgagctatatggagacattcgaaccatttatac 1062
Query: 900 tgcctgcaagcatcgtggttt 920
|||||||||||||||||||||
Sbjct: 1063 tgcctgcaagcatcgtggttt 1083
>gnl|LJGI|AV765211 weakly similar to UniRef100_Q6J732 Cluster: AML1; n=1; Solanum
lycopersicum|Rep: AML1 - Solanum lycopersicum (Tomato),
partial (2%)
Length = 408
Score = 785 bits (396), Expect = 0.0
Identities = 405/408 (99%)
Strand = Plus / Plus
Query: 1666 tcaagcgccattaacatggctgccaaaattggaactggatcagcagaactgtcagacagc 1725
||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 1 tcaagcgccattaacatggctgccaaaattggaactggatcagcagaactgccagacagc 60
Query: 1726 aggcgcattcctggaatcggctcaattgggaatcttcctgaatttaatgcaggaggaaat 1785
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 aggcgcattcctggaatcggctcaattgggaatcttcctgaatttaatgcaggaggaaat 120
Query: 1786 ggaagccgcccccttcatcaaccttatcatatgtggaatggttctaacttgcaccagcag 1845
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 ggaagccgcccccttcatcaaccttatcatatgtggaatggttctaacttgcaccagcag 180
Query: 1846 tctccatcaaatgccttgctttggcagaaaacaccatcatttggtgctggttctccatgt 1905
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 tctccatcaaatgccttgctttggcagaaaacaccatcatttggtgctggttctccatgt 240
Query: 1906 cttccacagatgcccagttttcccaggacaccgcctcatgtgatgagggcaccacatgtt 1965
||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 cttacacagatgcccagttttcccaggacaccgcctcatgtgatgagggcaccacatgtt 300
Query: 1966 gaccaccatgttggatcagctccagtaattgcgggctcaccctgggaaaggcaacactct 2025
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 gaccaccatgttggatcagctccagtaattgcgggctcaccctgggaaaggcaacactct 360
Query: 2026 tacttgggagagtctcctgatgcttctggtttgagaatgggttctcta 2073
||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 361 tacttgggagagtctcctgatgcttctggttagagaatgggttctcta 408
>gnl|LJGI|TC60430 similar to UniRef100_A7PHR4 Cluster: Chromosome chr17 scaffold_16,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr17 scaffold_16, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (9%)
Length = 858
Score = 478 bits (241), Expect = e-133
Identities = 241/241 (100%)
Strand = Plus / Plus
Query: 2604 agctgtacttgcatatgcccgaattcaaggaaaatctgctctcattgctcatttccagaa 2663
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 agctgtacttgcatatgcccgaattcaaggaaaatctgctctcattgctcatttccagaa 60
Query: 2664 ttcaagcctgatgaacgaagataaacgatgccgccctattctcttccatacagatggccc 2723
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 ttcaagcctgatgaacgaagataaacgatgccgccctattctcttccatacagatggccc 120
Query: 2724 aaatgctggtgatccggaacctttccccttgggtagcaatatccgcgtgaggcctggaaa 2783
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 aaatgctggtgatccggaacctttccccttgggtagcaatatccgcgtgaggcctggaaa 180
Query: 2784 atctcgcgccggtggtaatgaggagaatcgcggcctagggaatccttcaaccttggcaag 2843
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 atctcgcgccggtggtaatgaggagaatcgcggcctagggaatccttcaaccttggcaag 240
Query: 2844 t 2844
|
Sbjct: 241 t 241