Miyakogusa Predicted Gene
- Lj1g3v1386490.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj1g3v1386490.1 Non Chatacterized Hit- tr|I1JXT1|I1JXT1_SOYBN
Uncharacterized protein (Fragment) OS=Glycine max PE=3,78.85,0,P-loop
containing nucleoside triphosphate hydrolases,NULL; Double Clp-N
motif,NULL; CLPAB_1,Chaperon,CUFF.27292.1
(2901 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC68369 weakly similar to UniRef100_A9RTE5 Cluster: Pre... 1417 0.0
gnl|LJGI|TC66499 weakly similar to UniRef100_Q6H795 Cluster: ATP... 874 0.0
gnl|LJGI|AV778312 similar to UniRef100_A7P2B2 Cluster: Chromosom... 807 0.0
gnl|LJGI|BP054065 54 5e-06
>gnl|LJGI|TC68369 weakly similar to UniRef100_A9RTE5 Cluster: Predicted protein; n=1;
Physcomitrella patens subsp. patens|Rep: Predicted
protein - Physcomitrella patens subsp. patens, partial
(12%)
Length = 824
Score = 1417 bits (715), Expect = 0.0
Identities = 715/715 (100%)
Strand = Plus / Plus
Query: 1 atgcaagtttcatccccatcaatgaactcatgcttcggaaatttcactcccaacttttcc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 110 atgcaagtttcatccccatcaatgaactcatgcttcggaaatttcactcccaacttttcc 169
Query: 61 cggcaattccaatcagaaccatgctcaaccgccaccaccgtggtggcaaccacctcctac 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 170 cggcaattccaatcagaaccatgctcaaccgccaccaccgtggtggcaaccacctcctac 229
Query: 121 ccacttcgcgcaaagctgctattctcacgcgccggtccatcatcacgctgtaaactcaac 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 230 ccacttcgcgcaaagctgctattctcacgcgccggtccatcatcacgctgtaaactcaac 289
Query: 181 aactccctctcgtctctaccttctcagagaaaagcctgctcctttacctcgccggcgtta 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 290 aactccctctcgtctctaccttctcagagaaaagcctgctcctttacctcgccggcgtta 349
Query: 241 tcgccggcaaacagcagaaagacgaggaagcgaagagcgttcaccgtctctgcggttttc 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 350 tcgccggcaaacagcagaaagacgaggaagcgaagagcgttcaccgtctctgcggttttc 409
Query: 301 gagcggttcacggagagagcgataaaggctatagtgttttcccaaagggaagctaaagct 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 410 gagcggttcacggagagagcgataaaggctatagtgttttcccaaagggaagctaaagct 469
Query: 361 cttgggagtgaactggtttacgctcagcatctgttgttgggtcttgtagctgaagaggat 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 470 cttgggagtgaactggtttacgctcagcatctgttgttgggtcttgtagctgaagaggat 529
Query: 421 cgttcttctgatgggtttcttgcgtctggtgttactattgagaaggctcgtgatgctgtc 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 530 cgttcttctgatgggtttcttgcgtctggtgttactattgagaaggctcgtgatgctgtc 589
Query: 481 agaagcatttggcatcggaatggttcaaaccctgctcccccacgtggtgttggtgatggt 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 590 agaagcatttggcatcggaatggttcaaaccctgctcccccacgtggtgttggtgatggt 649
Query: 541 gatgataagggaggttctgtttatgctacaaatcttccattttcggttggggcgaagcgg 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 650 gatgataagggaggttctgtttatgctacaaatcttccattttcggttggggcgaagcgg 709
Query: 601 gtgtttgaggctgcggttgagtattcgaagtctttggggcataaattcgttgctcctgag 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 710 gtgtttgaggctgcggttgagtattcgaagtctttggggcataaattcgttgctcctgag 769
Query: 661 catattgcagttgctttggtcaaagttgatgatggaagtactagtagggtacttt 715
|||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 770 catattgcagttgctttggtcaaagttgatgatggaagtactagtagggtacttt 824
>gnl|LJGI|TC66499 weakly similar to UniRef100_Q6H795 Cluster: ATP-dependent Clp
protease ATP-binding subunit; n=2; Oryza sativa Japonica
Group|Rep: ATP-dependent Clp protease ATP-binding subunit
- Oryza sativa subsp. japonica (Rice), partial (13%)
Length = 712
Score = 874 bits (441), Expect = 0.0
Identities = 444/445 (99%)
Strand = Plus / Plus
Query: 2457 agatgacaaatcaacctcatataatggtttgaaatcgatggtaattgaagaactgaggac 2516
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 agatgacaaatcaacctcatataatggtttgaaatcgatggtaattgaagaactgaggac 60
Query: 2517 atattttcgtccagaattgctcaacaggatagttgaaattgtagtctttcaatcccttga 2576
|||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 61 atattttcgtccagaattgctcaacaggatagatgaaattgtagtctttcaatcccttga 120
Query: 2577 aaagtcacagttgcttgagatattggatgttctgctgcaagacgtaaagaaaaggataat 2636
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 aaagtcacagttgcttgagatattggatgttctgctgcaagacgtaaagaaaaggataat 180
Query: 2637 gtccctaggaattgatctagaagtgtctgaatcagtcaagaaccttgtatgcaaggaagg 2696
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 gtccctaggaattgatctagaagtgtctgaatcagtcaagaaccttgtatgcaaggaagg 240
Query: 2697 gtataacccaacatatggtgcacggcctcttaagagggccattacatcactaattgaaga 2756
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 gtataacccaacatatggtgcacggcctcttaagagggccattacatcactaattgaaga 300
Query: 2757 tccattgagtgaagcattcctctgtggaaagtgcaagcaaggtgacactgtcctcattga 2816
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 tccattgagtgaagcattcctctgtggaaagtgcaagcaaggtgacactgtcctcattga 360
Query: 2817 tttggatgttaatggtaacctccttgttacaaatcagcttgatcgaatagtcaacttatc 2876
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 tttggatgttaatggtaacctccttgttacaaatcagcttgatcgaatagtcaacttatc 420
Query: 2877 tgaaacaagccacccctgtaattaa 2901
|||||||||||||||||||||||||
Sbjct: 421 tgaaacaagccacccctgtaattaa 445
>gnl|LJGI|AV778312 similar to UniRef100_A7P2B2 Cluster: Chromosome chr19 scaffold_4,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr19 scaffold_4, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (4%)
Length = 610
Score = 807 bits (407), Expect = 0.0
Identities = 410/411 (99%)
Strand = Plus / Plus
Query: 1 atgcaagtttcatccccatcaatgaactcatgcttcggaaatttcactcccaacttttcc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 200 atgcaagtttcatccccatcaatgaactcatgcttcggaaatttcactcccaacttttcc 259
Query: 61 cggcaattccaatcagaaccatgctcaaccgccaccaccgtggtggcaaccacctcctac 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 260 cggcaattccaatcagaaccatgctcaaccgccaccaccgtggtggcaaccacctcctac 319
Query: 121 ccacttcgcgcaaagctgctattctcacgcgccggtccatcatcacgctgtaaactcaac 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 320 ccacttcgcgcaaagctgctattctcacgcgccggtccatcatcacgctgtaaactcaac 379
Query: 181 aactccctctcgtctctaccttctcagagaaaagcctgctcctttacctcgccggcgtta 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 380 aactccctctcgtctctaccttctcagagaaaagcctgctcctttacctcgccggcgtta 439
Query: 241 tcgccggcaaacagcagaaagacgaggaagcgaagagcgttcaccgtctctgcggttttc 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 440 tcgccggcaaacagcagaaagacgaggaagcgaagagcgttcaccgtctctgcggttttc 499
Query: 301 gagcggttcacggagagagcgataaaggctatagtgttttcccaaagggaagctaaagct 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 500 gagcggttcacggagagagcgataaaggctatagtgttttcccaaagggaagctaaagct 559
Query: 361 cttgggagtgaactggtttacgctcagcatctgttgttgggtcttgtagct 411
|||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 560 cttgggagtgaactggtttacgctcagcatctgtggttgggtcttgtagct 610
>gnl|LJGI|BP054065
Length = 347
Score = 54.0 bits (27), Expect = 5e-06
Identities = 39/43 (90%)
Strand = Plus / Minus
Query: 2827 aatggtaacctccttgttacaaatcagcttgatcgaatagtca 2869
|||||||||| || |||||| |||| |||||||||||||||||
Sbjct: 347 aatggtaacccccctgttaccaatccgcttgatcgaatagtca 305