Miyakogusa Predicted Gene

Lj1g3v1384120.1
Show Alignment:  

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj1g3v1384120.1 Non Chatacterized Hit- tr|K4B349|K4B349_SOLLC
Uncharacterized protein OS=Solanum lycopersicum
GN=Sol,47.01,1e-18,seg,NULL; coiled-coil,NULL,CUFF.27254.1
         (345 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|BE122502 similar to UniRef100_A9VCB7 Cluster: Predicted...    60   9e-09

>gnl|LJGI|BE122502 similar to UniRef100_A9VCB7 Cluster: Predicted protein; n=1;
           Monosiga brevicollis MX1|Rep: Predicted protein -
           Monosiga, partial (1%)
          Length = 348

 Score = 60.0 bits (30), Expect = 9e-09
 Identities = 88/106 (83%), Gaps = 1/106 (0%)
 Strand = Plus / Plus

                                                                       
Query: 68  ttggtaggctctgttcgggtcgtcgggtcatgggtcatggtgggtcatacgacattgaat 127
           |||||||||||||||| ||||||||| ||||||||   |||||    | ||| ||||| |
Sbjct: 10  ttggtaggctctgttcaggtcgtcggatcatgggttgcggtggtgacttcgatattgagt 69

                                                         
Query: 128 cttgggtcgagaccaaatgctcctcctgcgtcggtggcagaatagc 173
           | ||||||||||   |||||||||||||||| || |||||||||||
Sbjct: 70  cctgggtcgaga-tgaatgctcctcctgcgttggcggcagaatagc 114