Miyakogusa Predicted Gene

Lj1g3v1382080.1
Show Alignment:  

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj1g3v1382080.1 Non Chatacterized Hit- tr|B9RHN0|B9RHN0_RICCO
R2r3-myb transcription factor, putative OS=Ricinus
com,44.9,0.000000000003,seg,NULL,CUFF.27261.1
         (463 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|TC68813 similar to UniRef100_Q0PJL6 Cluster: MYB transc...   910   0.0  

>gnl|LJGI|TC68813 similar to UniRef100_Q0PJL6 Cluster: MYB transcription factor
           MYB56; n=1; Glycine max|Rep: MYB transcription factor
           MYB56 - Glycine max (Soybean), partial (23%)
          Length = 849

 Score =  910 bits (459), Expect = 0.0
 Identities = 462/463 (99%)
 Strand = Plus / Plus

                                                                       
Query: 1   atgaaaaacgacagcagcaccaacatcatcatcagcaacaacaatgataataacattacc 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 202 atgaaaaacgacagcagcaccaacatcatcatcagcaacaacaatgataataacattacc 261

                                                                       
Query: 61  aacaacatcagttttcagttagtaaagattggaaacgatacagttcacgaagattcaaac 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 262 aacaacatcagttttcagttagtaaagattggaaacgatacagttcacgaagattcaaac 321

                                                                       
Query: 121 agcagcagcggtgttacaatagaagaagcctcccctcatcatcatcaacaactcaacttg 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 322 agcagcagcggtgttacaatagaagaagcctcccctcatcatcatcaacaactcaacttg 381

                                                                       
Query: 181 gaactttccattggccttccctctcatcaatatcagaaccagttagcttcttcttcttcc 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 382 gaactttccattggccttccctctcatcaatatcagaaccagttagcttcttcttcttcc 441

                                                                       
Query: 241 gtgaagttgaaacatgagcaacaagaagaaccaccacgtattaatttgtatcaacagtgg 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 442 gtgaagttgaaacatgagcaacaagaagaaccaccacgtattaatttgtatcaacagtgg 501

                                                                       
Query: 301 tgtgggaacgttagtcaaggtgcgtgcgtgtgttacggtctagggtttcaaaccaaccaa 360
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 502 tgtgggaacgttagtcaaggtgcgtgcgtgtgttacggtctagggtttcaaaccaaccaa 561

                                                                       
Query: 361 gcgtgttgctgcagagccatggctactgctgctgctacaaaagttacaaaagctgccaat 420
           |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 562 gcgtgttgctgcagagccatggctactgctgctgctacaacagttacaaaagctgccaat 621

                                                      
Query: 421 gaagatgatatctttagattttacagacccatgaatgtttaga 463
           |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 622 gaagatgatatctttagattttacagacccatgaatgtttaga 664