Miyakogusa Predicted Gene
- Lj1g3v1380790.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj1g3v1380790.1 Non Chatacterized Hit- tr|I1JXW3|I1JXW3_SOYBN
Uncharacterized protein OS=Glycine max PE=4 SV=1,71.36,0,SUBFAMILY NOT
NAMED,NULL; FAMILY NOT NAMED,NULL; seg,NULL; coiled-coil,NULL;
DUF668,Protein of unkno,CUFF.27235.1
(1866 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC71901 homologue to UniRef100_A7QN13 Cluster: Chromoso... 1110 0.0
gnl|LJGI|TC65906 weakly similar to UniRef100_A7PKM8 Cluster: Chr... 690 0.0
gnl|LJGI|FS335736 similar to UniRef100_A7PKM8 Cluster: Chromosom... 375 e-103
gnl|LJGI|TC61632 similar to UniRef100_A7QN13 Cluster: Chromosome... 109 6e-23
gnl|LJGI|TC76484 weakly similar to UniRef100_Q9LS83 Cluster: Sim... 100 6e-20
gnl|LJGI|BP051713 92 1e-17
gnl|LJGI|TC77405 similar to UniRef100_A7QN12 Cluster: Chromosome... 92 1e-17
gnl|LJGI|TC70720 90 6e-17
gnl|LJGI|BP057923 88 2e-16
gnl|LJGI|TC74681 74 3e-12
>gnl|LJGI|TC71901 homologue to UniRef100_A7QN13 Cluster: Chromosome undetermined
scaffold_129, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome undetermined scaffold_129, whole
genome shotgun sequence - Vitis vinifera (Grape), partial
(7%)
Length = 1040
Score = 1110 bits (560), Expect = 0.0
Identities = 560/560 (100%)
Strand = Plus / Plus
Query: 1307 caaacacatccaaagcacatcatggttttggttgggtcggggagtgggcaaacacaggct 1366
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 caaacacatccaaagcacatcatggttttggttgggtcggggagtgggcaaacacaggct 60
Query: 1367 ctgaagcgaataggaaggctgtccagactggtatcatgcggatcgagacattccatcatg 1426
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 ctgaagcgaataggaaggctgtccagactggtatcatgcggatcgagacattccatcatg 120
Query: 1427 cagataaaggcaaagtagaatactatattgtggaccttctgttatggcttcaacgtttgg 1486
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 cagataaaggcaaagtagaatactatattgtggaccttctgttatggcttcaacgtttgg 180
Query: 1487 ccattaaaataaaagctggcagcgatgctggtaaagtgaagtctcctatgaaatcttctg 1546
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 ccattaaaataaaagctggcagcgatgctggtaaagtgaagtctcctatgaaatcttctg 240
Query: 1547 ctggcactacctcggaaaagacgaacaaggagtctacaaatgccctatcaccaatattaa 1606
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 ctggcactacctcggaaaagacgaacaaggagtctacaaatgccctatcaccaatattaa 300
Query: 1607 caattgatgagcaaaccatgctgcaggatgtaagtaagaaagcactaattaaagggatca 1666
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 caattgatgagcaaaccatgctgcaggatgtaagtaagaaagcactaattaaagggatca 360
Query: 1667 gtaaaagcatggactttgacagtctcaggagtaggttgagggagaactacagactcacca 1726
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 gtaaaagcatggactttgacagtctcaggagtaggttgagggagaactacagactcacca 420
Query: 1727 agagttggagtctttcatcaactaaaagcaaggaactctcttttaataggattttgtcta 1786
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 agagttggagtctttcatcaactaaaagcaaggaactctcttttaataggattttgtcta 480
Query: 1787 agcttcctgtgattgattttgacatcgacaaagaaagagcattgaatgtgatagacagac 1846
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 481 agcttcctgtgattgattttgacatcgacaaagaaagagcattgaatgtgatagacagac 540
Query: 1847 tagatgtggtaagataattc 1866
||||||||||||||||||||
Sbjct: 541 tagatgtggtaagataattc 560
>gnl|LJGI|TC65906 weakly similar to UniRef100_A7PKM8 Cluster: Chromosome chr7
scaffold_20, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome chr7 scaffold_20, whole genome
shotgun sequence - Vitis vinifera (Grape), partial (15%)
Length = 650
Score = 690 bits (348), Expect = 0.0
Identities = 351/352 (99%)
Strand = Plus / Plus
Query: 168 tgatttcaccactccgcctcaaccacgcgaaaccatggaccgaaaccttccagaaccttc 227
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 299 tgatttcaccactccgcctcaaccacgcgaaaccatggaccgaaaccttccagaaccttc 358
Query: 228 cgatttctacgacggaatccctcgtttccccgataaacctagggctagagcatccaaggt 287
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 359 cgatttctacgacggaatccctcgtttccccgataaacctagggctagagcatccaaggt 418
Query: 288 ttcggaggtgagttcgcggctaggaagagttggattggaggttttggacactctaggcag 347
| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 419 tccggaggtgagttcgcggctaggaagagttggattggaggttttggacactctaggcag 478
Query: 348 cagcgttaccaatctgaactccggcggtggattcgtttctggtgctgctatcaaggggaa 407
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 479 cagcgttaccaatctgaactccggcggtggattcgtttctggtgctgctatcaaggggaa 538
Query: 408 tgaggttgccatcttagcgtttgaagttgccaacaccctcgtcaaaggttttcatctcgt 467
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 539 tgaggttgccatcttagcgtttgaagttgccaacaccctcgtcaaaggttttcatctcgt 598
Query: 468 gcaatctctctcgcctcaaaatatcaggcatttgaatgaggacgtgcttctt 519
||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 599 gcaatctctctcgcctcaaaatatcaggcatttgaatgaggacgtgcttctt 650
Score = 198 bits (100), Expect = 9e-50
Identities = 100/100 (100%)
Strand = Plus / Plus
Query: 1 atggcaactgcttccaattcaaagattgagttcctcgtctggttgtctcaaatcatgggc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 132 atggcaactgcttccaattcaaagattgagttcctcgtctggttgtctcaaatcatgggc 191
Query: 61 ggtctctgctcccgctccgccaccgttgaccgcgtcttcg 100
||||||||||||||||||||||||||||||||||||||||
Sbjct: 192 ggtctctgctcccgctccgccaccgttgaccgcgtcttcg 231
>gnl|LJGI|FS335736 similar to UniRef100_A7PKM8 Cluster: Chromosome chr7 scaffold_20,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr7 scaffold_20, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (33%)
Length = 789
Score = 375 bits (189), Expect = e-103
Identities = 413/485 (85%), Gaps = 2/485 (0%)
Strand = Plus / Plus
Query: 884 ttaaaagtcaaaagaagcaaattaaacatttaaagaaaaaatcactctggtctagaagtt 943
|||||||||||||||||||| |||| ||||| |||||||| ||||| ||||| |||||||
Sbjct: 70 ttaaaagtcaaaagaagcaagttaagcatttgaagaaaaagtcactttggtccagaagtt 129
Query: 944 tggaggaggttgtagagaagcttgtagatattgtccattttttacatttggagataagca 1003
||||||||||| | ||||||||||| || || || |||| ||| ||||||||||| | ||
Sbjct: 130 tggaggaggttatggagaagcttgtggacatagtacattatttgcatttggagattaaca 189
Query: 1004 atgcctttggaagtgaagatggctacaaaccaataattggacacatg-agcaatcgccaa 1062
|||||||||| |||| |||| | |||||| ||| | | ||| | ||||| | ||||
Sbjct: 190 atgcctttggcagtgcagattccggtaaaccattaactcaa-acaagcagcaaccaccaa 248
Query: 1063 agactaggtcctgctggccttgctttgcattatgcaaatatagtgcttcaaattgatact 1122
||| | |||||||| || ||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 249 agattgggtcctgcaggacttgctttgcattatgcaaatatagtgctccaaattgatact 308
Query: 1123 cttgtagccagatctagtgctatgccttcgaatttaagggatacattatatcaaagcttg 1182
|| || || ||||| ||| ||||||| | ||| |||||||||||||||||| ||||||
Sbjct: 309 ctggtcgctagatccagttatatgcctgcaaatacaagggatacattatatcagagcttg 368
Query: 1183 cctcctaatataaaatcagctctacgttccaaattaccatcctttcgtgttgtagaagag 1242
|||||||||||||||| | || | ||||||||||| ||| |||||| ||||||| |||||
Sbjct: 369 cctcctaatataaaattaactttgcgttccaaattgccaacctttcatgttgtaaaagag 428
Query: 1243 ctaactgtagcagatatcaaagaagagatggagaaaacattacaatggttggttcccatt 1302
|| ||| | ||||||| ||||| ||||||||||||||||| || ||| ||||||| ||
Sbjct: 429 ctcactatgacagatattaaagatgagatggagaaaacattgcattggctggttccaatg 488
Query: 1303 gccacaaacacatccaaagcacatcatggttttggttgggtcggggagtgggcaaacaca 1362
|| ||||||||| |||| || |||||||||||||||||||| ||||||||||||||||||
Sbjct: 489 gctacaaacacagccaaggcgcatcatggttttggttgggtaggggagtgggcaaacaca 548
Query: 1363 ggctc 1367
|||||
Sbjct: 549 ggctc 553
>gnl|LJGI|TC61632 similar to UniRef100_A7QN13 Cluster: Chromosome undetermined
scaffold_129, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome undetermined scaffold_129, whole
genome shotgun sequence - Vitis vinifera (Grape), partial
(5%)
Length = 1005
Score = 109 bits (55), Expect = 6e-23
Identities = 106/123 (86%)
Strand = Plus / Plus
Query: 1742 catcaactaaaagcaaggaactctcttttaataggattttgtctaagcttcctgtgattg 1801
|||||| || |||||||||||| ||||| |||| |||| ||||||||||||||||||||
Sbjct: 365 catcaagtagaagcaaggaactatctttaaataaaatttcgtctaagcttcctgtgattg 424
Query: 1802 attttgacatcgacaaagaaagagcattgaatgtgatagacagactagatgtggtaagat 1861
|||||| || |||||| | ||| ||||| ||||||| |||||||||||||||| ||||
Sbjct: 425 attttggtattgacaaaaagagaacattggatgtgattgacagactagatgtggccagat 484
Query: 1862 aat 1864
|||
Sbjct: 485 aat 487
>gnl|LJGI|TC76484 weakly similar to UniRef100_Q9LS83 Cluster: Similarity to Ac-like
transposase; n=1; Arabidopsis thaliana|Rep: Similarity
to Ac-like transposase - Arabidopsis thaliana (Mouse-ear
cress), partial (6%)
Length = 882
Score = 99.6 bits (50), Expect = 6e-20
Identities = 77/86 (89%)
Strand = Plus / Plus
Query: 690 caaggaatcaaatgctcagagactatcaagagatgaggcagaatcaatcatgcagcagtt 749
|||||||||||||||| ||||| | |||| | ||||||||||||||||||||||||| ||
Sbjct: 434 caaggaatcaaatgcttagagattgtcaataaatgaggcagaatcaatcatgcagcactt 493
Query: 750 gatgaacctggttcaatatacagctg 775
||||| | ||||||||| ||||||||
Sbjct: 494 gatgaccttggttcaatttacagctg 519
>gnl|LJGI|BP051713
Length = 444
Score = 91.7 bits (46), Expect = 1e-17
Identities = 58/62 (93%)
Strand = Plus / Minus
Query: 490 atcaggcatttgaatgaggacgtgcttctttcaaagtctgtgcaggatttggtgtccaag 549
||||||||||||||||| || |||||||||||| || |||||||||||||||||||||||
Sbjct: 331 atcaggcatttgaatgaagatgtgcttctttcagaggctgtgcaggatttggtgtccaag 272
Query: 550 ga 551
||
Sbjct: 271 ga 270
>gnl|LJGI|TC77405 similar to UniRef100_A7QN12 Cluster: Chromosome undetermined
scaffold_129, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome undetermined scaffold_129,
whole genome shotgun sequence - Vitis vinifera (Grape),
partial (7%)
Length = 478
Score = 91.7 bits (46), Expect = 1e-17
Identities = 58/62 (93%)
Strand = Plus / Plus
Query: 490 atcaggcatttgaatgaggacgtgcttctttcaaagtctgtgcaggatttggtgtccaag 549
||||||||||||||||| || |||||||||||| || |||||||||||||||||||||||
Sbjct: 131 atcaggcatttgaatgaagatgtgcttctttcagaggctgtgcaggatttggtgtccaag 190
Query: 550 ga 551
||
Sbjct: 191 ga 192
>gnl|LJGI|TC70720
Length = 750
Score = 89.7 bits (45), Expect = 6e-17
Identities = 57/61 (93%)
Strand = Plus / Plus
Query: 490 atcaggcatttgaatgaggacgtgcttctttcaaagtctgtgcaggatttggtgtccaag 549
||||||||||||||||| || |||||||||||| || |||||||||||||||||||||||
Sbjct: 58 atcaggcatttgaatgaagatgtgcttctttcagaggctgtgcaggatttggtgtccaag 117
Query: 550 g 550
|
Sbjct: 118 g 118
>gnl|LJGI|BP057923
Length = 516
Score = 87.7 bits (44), Expect = 2e-16
Identities = 56/60 (93%)
Strand = Plus / Minus
Query: 490 atcaggcatttgaatgaggacgtgcttctttcaaagtctgtgcaggatttggtgtccaag 549
||||||||||||||||| || |||||||||||| || |||||||||||||||||||||||
Sbjct: 440 atcaggcatttgaatgaagatgtgcttctttcagaggctgtgcaggatttggtgtccaag 381
>gnl|LJGI|TC74681
Length = 696
Score = 73.8 bits (37), Expect = 3e-12
Identities = 49/53 (92%)
Strand = Plus / Plus
Query: 722 atgaggcagaatcaatcatgcagcagttgatgaacctggttcaatatacagct 774
||||||||||||||||||||||||| ||||||| | ||||||||| |||||||
Sbjct: 8 atgaggcagaatcaatcatgcagcacttgatgaccttggttcaatttacagct 60