Miyakogusa Predicted Gene
- Lj1g3v1379770.4
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj1g3v1379770.4 Non Chatacterized Hit- tr|I1KBR6|I1KBR6_SOYBN
Uncharacterized protein OS=Glycine max PE=4
SV=1,87.57,0,Mg_trans_NIPA,Magnesium transporter NIPA; seg,NULL;
UNCHARACTERIZED,Magnesium transporter NIPA,CUFF.27220.4
(1041 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|DC598758 similar to UniRef100_A7QLQ6 Cluster: Chromosom... 1126 0.0
gnl|LJGI|FS332886 similar to UniRef100_A7PKM9 Cluster: Chromosom... 406 e-112
gnl|LJGI|TC72648 similar to UniRef100_A7PKM9 Cluster: Chromosome... 107 1e-22
gnl|LJGI|TC74430 similar to UniRef100_A7PKM9 Cluster: Chromosome... 105 5e-22
gnl|LJGI|FS339969 similar to UniRef100_A7PKM9 Cluster: Chromosom... 90 3e-17
gnl|LJGI|TC75616 similar to UniRef100_A7P873 Cluster: Chromosome... 84 2e-15
gnl|LJGI|TC73323 UniRef100_A7PKM9 Cluster: Chromosome chr7 scaff... 54 2e-06
>gnl|LJGI|DC598758 similar to UniRef100_A7QLQ6 Cluster: Chromosome chr18 scaffold_121,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr18 scaffold_121, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (52%)
Length = 568
Score = 1126 bits (568), Expect = 0.0
Identities = 568/568 (100%)
Strand = Plus / Plus
Query: 273 tgctgtcctggcacatttcatgttgggggagaagctgcagaagatgggtatgctagggtg 332
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 tgctgtcctggcacatttcatgttgggggagaagctgcagaagatgggtatgctagggtg 60
Query: 333 tcttctctgtatagtggggtccactatgattgtgctccatgcgcctcaggaaaagtctct 392
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 tcttctctgtatagtggggtccactatgattgtgctccatgcgcctcaggaaaagtctct 120
Query: 393 tagttctgtgctggaaatatggcaattggctgttcaaccagcatttcttatgtacacagc 452
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 tagttctgtgctggaaatatggcaattggctgttcaaccagcatttcttatgtacacagc 180
Query: 453 ttcagcaatggctgtaacattctttctgattttgtattgtgctccccgctatggccagac 512
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 ttcagcaatggctgtaacattctttctgattttgtattgtgctccccgctatggccagac 240
Query: 513 taatatttttgtgtatattggaatatgctccataattggatccttaactgtcatgagtgt 572
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 taatatttttgtgtatattggaatatgctccataattggatccttaactgtcatgagtgt 300
Query: 573 aaaagcaattggcattgctataaaacttacattggatggtgcaaaccagtttttctacat 632
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 aaaagcaattggcattgctataaaacttacattggatggtgcaaaccagtttttctacat 360
Query: 633 tccgacatggattttcacaacggttgctatttcctgcatcattactcaattaaattacct 692
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 tccgacatggattttcacaacggttgctatttcctgcatcattactcaattaaattacct 420
Query: 693 taatatggctctggatattttcaacacagcagttgtttctcctatctattatgccttgtt 752
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 taatatggctctggatattttcaacacagcagttgtttctcctatctattatgccttgtt 480
Query: 753 cacatcttttacaatattagctagcgcaatcatgtttaaggattattctggtcaaagtat 812
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 481 cacatcttttacaatattagctagcgcaatcatgtttaaggattattctggtcaaagtat 540
Query: 813 aagcaatattgcatcagagctttgtggc 840
||||||||||||||||||||||||||||
Sbjct: 541 aagcaatattgcatcagagctttgtggc 568
>gnl|LJGI|FS332886 similar to UniRef100_A7PKM9 Cluster: Chromosome chr7 scaffold_20,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr7 scaffold_20, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (55%)
Length = 801
Score = 406 bits (205), Expect = e-112
Identities = 468/555 (84%), Gaps = 3/555 (0%)
Strand = Plus / Plus
Query: 49 gctttcatcggctccagcttcatcatcaagaaaaagggtctccaacgcgccgccaccctc 108
||||||||||||||||||||||||||||||||||||||||| |||| ||||| |
Sbjct: 250 gctttcatcggctccagcttcatcatcaagaaaaagggtcttcaactcgccggtg---tt 306
Query: 109 agcggctctcgcgccagtggtggtggctatggttatctccttcaacctctttggtggttt 168
| ||| |||| ||||||| ||||||||||||||| | ||||||||||| |||||| |
Sbjct: 307 aacggtcctcgtgccagtgttggtggctatggttacttgcttcaacctctctggtgggtc 366
Query: 169 ggaatggttactatgattgttggcgagattgcgaattttgttgcctacatttatgcccct 228
|||||| |||| ||||||||||| ||||| |||||||| ||||| |||||||| |||||
Sbjct: 367 ggaatgattaccatgattgttggagagatagcgaatttcgttgcatacatttacgccccg 426
Query: 229 gcggtgcttgttactccacttggtgctttgagtattattgttagtgctgtcctggcacat 288
|| |||||||||||||||||||||||||||||||||||||||||||||||| | || |||
Sbjct: 427 gctgtgcttgttactccacttggtgctttgagtattattgttagtgctgtcttagcgcat 486
Query: 289 ttcatgttgggggagaagctgcagaagatgggtatgctagggtgtcttctctgtatagtg 348
||| | |||| ||||||||||||||| ||||| ||||| ||||||||||| || || |||
Sbjct: 487 ttcctcttggaggagaagctgcagaaaatgggcatgctggggtgtcttctatgcattgtg 546
Query: 349 gggtccactatgattgtgctccatgcgcctcaggaaaagtctcttagttctgtgctggaa 408
|| || ||| | |||||||||||||| ||| | || | ||||||||||||||||| |||
Sbjct: 547 ggatctactgttattgtgctccatgctcctgaagagatgtctcttagttctgtgcaagaa 606
Query: 409 atatggcaattggctgttcaaccagcatttcttatgtacacagcttcagcaatggctgta 468
|| ||| || |||| |||||||| || || || |||||| || |||| || || ||
Sbjct: 607 atttgggaactggccgttcaacccgcgttcctctcgtacacggccgcagccattgccgtg 666
Query: 469 acattctttctgattttgtattgtgctccccgctatggccagactaatatttttgtgtat 528
||||| ||| |||||||| ||| ||||||| |||||||||||||||||| || |||
Sbjct: 667 acattggctcttgttttgtatattgcgccccgctttggccagactaatattttggtttat 726
Query: 529 attggaatatgctccataattggatccttaactgtcatgagtgtaaaagcaattggcatt 588
||||||||||||| ||||||| |||||||||||||||||||| |||||||||||||||
Sbjct: 727 gttggaatatgctctgtaattgggtccttaactgtcatgagtgtgaaagcaattggcatt 786
Query: 589 gctataaaacttaca 603
|| || |||||||||
Sbjct: 787 gcaatgaaacttaca 801
>gnl|LJGI|TC72648 similar to UniRef100_A7PKM9 Cluster: Chromosome chr7 scaffold_20,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr7 scaffold_20, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (12%)
Length = 586
Score = 107 bits (54), Expect = 1e-22
Identities = 141/170 (82%)
Strand = Plus / Plus
Query: 872 tgcacagtacaagagaaccagatcctccagacagtacagatctttacagtcccttgtctc 931
||||||||||||||||||| |||||||||| || ||||||| | || | || |||||||
Sbjct: 3 tgcacagtacaagagaaccggatcctccagccattacagatttatatacaccattgtctc 62
Query: 932 caaaagtatcatggtacatccaaggcaatggcgaaacttggaaacagaaggaggaagatg 991
| |||||||||||| ||||||||| |||| ||| ||||||||||| ||||||||||
Sbjct: 63 ttagagtatcatggtatatccaaggccatggtgaactctggaaacagaaagaggaagatg 122
Query: 992 aacaacccttcagtttaatcacagttattcggcaagaccatttcaagtga 1041
| |||| | | ||||||||| |||| |||||||| ||||||||||||
Sbjct: 123 ttccaccccttaatttaatcactattatacggcaagatcatttcaagtga 172
>gnl|LJGI|TC74430 similar to UniRef100_A7PKM9 Cluster: Chromosome chr7 scaffold_20,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr7 scaffold_20, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (8%)
Length = 606
Score = 105 bits (53), Expect = 5e-22
Identities = 101/117 (86%)
Strand = Plus / Plus
Query: 925 ttgtctccaaaagtatcatggtacatccaaggcaatggcgaaacttggaaacagaaggag 984
|||||||| | |||||||||||| |||||||||||||| ||| | ||||||||||| |||
Sbjct: 95 ttgtctcctagagtatcatggtatatccaaggcaatggtgaaccctggaaacagaaagag 154
Query: 985 gaagatgaacaacccttcagtttaatcacagttattcggcaagaccatttcaagtga 1041
||||||| | |||| | | |||||||||| |||| |||||||| ||||||||||||
Sbjct: 155 gaagatgttccacccattaatttaatcacaattatacggcaagatcatttcaagtga 211
>gnl|LJGI|FS339969 similar to UniRef100_A7PKM9 Cluster: Chromosome chr7 scaffold_20,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr7 scaffold_20, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (16%)
Length = 763
Score = 89.7 bits (45), Expect = 3e-17
Identities = 110/131 (83%), Gaps = 3/131 (2%)
Strand = Plus / Plus
Query: 49 gctttcatcggctccagcttcatcatcaagaaaaagggtctccaacgcgccgccaccctc 108
||||||||||||||||||||||||||||||||||||||||| |||| ||||| |
Sbjct: 185 gctttcatcggctccagcttcatcatcaagaaaaagggtcttcaactcgccg---gtgtt 241
Query: 109 agcggctctcgcgccagtggtggtggctatggttatctccttcaacctctttggtggttt 168
| ||| |||| ||||||| ||||||||||||||| | ||||||||||| |||||| |
Sbjct: 242 aacggtcctcgtgccagtgttggtggctatggttacttgcttcaacctctctggtgggtc 301
Query: 169 ggaatggttac 179
|||||| ||||
Sbjct: 302 ggaatgattac 312
>gnl|LJGI|TC75616 similar to UniRef100_A7P873 Cluster: Chromosome chr3 scaffold_8,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr3 scaffold_8, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (49%)
Length = 486
Score = 83.8 bits (42), Expect = 2e-15
Identities = 114/138 (82%)
Strand = Plus / Plus
Query: 141 ttatctccttcaacctctttggtggtttggaatggttactatgattgttggcgagattgc 200
|||||| ||| |||| ||||||||| ||| ||||| || |||||| |||| ||||||||
Sbjct: 275 ttatctacttgaaccactttggtgggctggcatggtaacaatgattattggggagattgc 334
Query: 201 gaattttgttgcctacatttatgcccctgcggtgcttgttactccacttggtgctttgag 260
||||||||||| || || ||||| || || || || |||||||| |||||||| | ||
Sbjct: 335 aaattttgttgcttatatctatgctccagcagttctggttactccccttggtgcacttag 394
Query: 261 tattattgttagtgctgt 278
||||||||| ||||||||
Sbjct: 395 tattattgtcagtgctgt 412
>gnl|LJGI|TC73323 UniRef100_A7PKM9 Cluster: Chromosome chr7 scaffold_20, whole genome
shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome
chr7 scaffold_20, whole genome shotgun sequence - Vitis
vinifera (Grape), partial (5%)
Length = 543
Score = 54.0 bits (27), Expect = 2e-06
Identities = 36/39 (92%)
Strand = Plus / Plus
Query: 300 ggagaagctgcagaagatgggtatgctagggtgtcttct 338
||||||||||||||| ||||| ||||| |||||||||||
Sbjct: 37 ggagaagctgcagaaaatgggcatgctggggtgtcttct 75