Miyakogusa Predicted Gene
- Lj1g3v1378690.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj1g3v1378690.1 tr|G7JLC6|G7JLC6_MEDTR ATP synthase OS=Medicago
truncatula GN=MTR_4g103330 PE=3 SV=1,82.14,0.004, ,CUFF.27211.1
(243 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC70198 similar to UniRef100_Q02758 Cluster: ATP syntha... 482 e-136
gnl|LJGI|TC69355 similar to UniRef100_Q02758 Cluster: ATP syntha... 418 e-117
gnl|LJGI|TC64798 similar to UniRef100_A7QLT3 Cluster: Chromosome... 204 2e-52
gnl|LJGI|TC64857 similar to UniRef100_Q02758 Cluster: ATP syntha... 133 5e-31
gnl|LJGI|FS337792 similar to UniRef100_Q02758 Cluster: ATP synth... 88 3e-17
>gnl|LJGI|TC70198 similar to UniRef100_Q02758 Cluster: ATP synthase delta chain,
chloroplast precursor; n=1; Pisum sativum|Rep: ATP
synthase delta chain, chloroplast precursor - Pisum
sativum (Garden pea), partial (29%)
Length = 525
Score = 482 bits (243), Expect = e-136
Identities = 243/243 (100%)
Strand = Plus / Plus
Query: 1 atggcttcgttgggtggcagtttgaattccgccgccaccagctacgcctccatactcgcc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 79 atggcttcgttgggtggcagtttgaattccgccgccaccagctacgcctccatactcgcc 138
Query: 61 gacgtggagaagctccagaccctcttttctgaccccaaggtgttcgactatttctccaac 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 139 gacgtggagaagctccagaccctcttttctgaccccaaggtgttcgactatttctccaac 198
Query: 121 ccaatcgtccgcgtcgaagacaaagcaggtgcagaagctcactggtccaagaatgtgagg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 199 ccaatcgtccgcgtcgaagacaaagcaggtgcagaagctcactggtccaagaatgtgagg 258
Query: 181 attaagacccagcttgacccgagtttagtggctgtgaggtatgggaattctgggtctaag 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 259 attaagacccagcttgacccgagtttagtggctgtgaggtatgggaattctgggtctaag 318
Query: 241 tga 243
|||
Sbjct: 319 tga 321
>gnl|LJGI|TC69355 similar to UniRef100_Q02758 Cluster: ATP synthase delta chain,
chloroplast precursor; n=1; Pisum sativum|Rep: ATP
synthase delta chain, chloroplast precursor - Pisum
sativum (Garden pea), partial (12%)
Length = 850
Score = 418 bits (211), Expect = e-117
Identities = 217/219 (99%)
Strand = Plus / Plus
Query: 1 atggcttcgttgggtggcagtttgaattccgccgccaccagctacgcctccatactcgcc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 193 atggcttcgttgggtggcagtttgaattccgccgccaccagctacgcctccatactcacc 252
Query: 61 gacgtggagaagctccagaccctcttttctgaccccaaggtgttcgactatttctccaac 120
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 253 gacgtggagaagctccagaccctcttttctgaccccaaggtgttcgactatttctccaaa 312
Query: 121 ccaatcgtccgcgtcgaagacaaagcaggtgcagaagctcactggtccaagaatgtgagg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 313 ccaatcgtccgcgtcgaagacaaagcaggtgcagaagctcactggtccaagaatgtgagg 372
Query: 181 attaagacccagcttgacccgagtttagtggctgtgagg 219
|||||||||||||||||||||||||||||||||||||||
Sbjct: 373 attaagacccagcttgacccgagtttagtggctgtgagg 411
>gnl|LJGI|TC64798 similar to UniRef100_A7QLT3 Cluster: Chromosome chr18 scaffold_121,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr18 scaffold_121, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (10%)
Length = 1082
Score = 204 bits (103), Expect = 2e-52
Identities = 132/139 (94%), Gaps = 2/139 (1%)
Strand = Plus / Plus
Query: 77 agaccctcttttctgacccc-aaggtgttcgactatttctccaacccaatcgtccgcgtc 135
|||||||||||||||||||| ||||||||||||||||||||||| |||| |||| |||||
Sbjct: 228 agaccctcttttctgacccctaaggtgttcgactatttctccaaaccaaccgtctgcgtc 287
Query: 136 gaagacaaagcaggtgcagaagctcactgg-tccaagaatgtgaggattaagacccagct 194
||| || ||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 288 gaacaccaagcaggtgcagaagctcactgggtccaagaatgtgaggattaagacccagct 347
Query: 195 tgacccgagtttagtggct 213
|||||||||||||||||||
Sbjct: 348 tgacccgagtttagtggct 366
>gnl|LJGI|TC64857 similar to UniRef100_Q02758 Cluster: ATP synthase delta chain,
chloroplast precursor; n=1; Pisum sativum|Rep: ATP
synthase delta chain, chloroplast precursor - Pisum
sativum (Garden pea), partial (79%)
Length = 1076
Score = 133 bits (67), Expect = 5e-31
Identities = 82/87 (94%)
Strand = Plus / Plus
Query: 57 cgccgacgtggagaagctccagaccctcttttctgaccccaaggtgttcgactatttctc 116
||||||||||||||||||| |||| |||||||||||| ||||||||||||||||||||||
Sbjct: 439 cgccgacgtggagaagctcgagacgctcttttctgacgccaaggtgttcgactatttctc 498
Query: 117 caacccaatcgtccgcgtcgaagacaa 143
|||||||| ||||||| ||||||||||
Sbjct: 499 caacccaaccgtccgcatcgaagacaa 525
Score = 129 bits (65), Expect = 8e-30
Identities = 98/109 (89%), Gaps = 10/109 (9%)
Strand = Plus / Plus
Query: 143 aagcaggtgcagaagctcactgg-tccaagaatgtgaggattaagacccagcttgacccg 201
||||||||||||||||||||||| || |||||||||||||||||||||||||||||||||
Sbjct: 737 aagcaggtgcagaagctcactgggtcgaagaatgtgaggattaagacccagcttgacccg 796
Query: 202 agtttagtgg---------ctgtgaggtatgggaattctgggtctaagt 241
|||||||||| ||||||||||||||||||||||||||||||
Sbjct: 797 agtttagtggcgggtttcactgtgaggtatgggaattctgggtctaagt 845
Score = 60.0 bits (30), Expect = 6e-09
Identities = 36/38 (94%)
Strand = Plus / Plus
Query: 28 tccgccgccaccagctacgcctccatactcgccgacgt 65
|||||||||||||||||||||||| ||||||||||||
Sbjct: 368 tccgccgccaccagctacgcctccgcactcgccgacgt 405
>gnl|LJGI|FS337792 similar to UniRef100_Q02758 Cluster: ATP synthase delta chain,
chloroplast precursor; n=1; Pisum sativum|Rep: ATP
synthase delta chain, chloroplast precursor - Pisum
sativum (Garden pea), partial (9%)
Length = 794
Score = 87.7 bits (44), Expect = 3e-17
Identities = 66/72 (91%), Gaps = 1/72 (1%)
Strand = Plus / Plus
Query: 77 agaccctcttttctgacccc-aaggtgttcgactatttctccaacccaatcgtccgcgtc 135
|||||||||||||||||||| ||||||||||||||||||||||| |||| |||| |||||
Sbjct: 246 agaccctcttttctgacccctaaggtgttcgactatttctccaaaccaaccgtctgcgtc 305
Query: 136 gaagacaaagca 147
||| || |||||
Sbjct: 306 gaacaccaagca 317
Score = 61.9 bits (31), Expect = 2e-09
Identities = 31/31 (100%)
Strand = Plus / Plus
Query: 183 taagacccagcttgacccgagtttagtggct 213
|||||||||||||||||||||||||||||||
Sbjct: 319 taagacccagcttgacccgagtttagtggct 349