Miyakogusa Predicted Gene
- Lj1g3v1374530.2
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj1g3v1374530.2 Non Chatacterized Hit- tr|D8SJR3|D8SJR3_SELML
Putative uncharacterized protein OS=Selaginella
moelle,29.44,4e-18,coiled-coil,NULL; ZINC FINGER, CCHC DOMAIN
CONTAINING 11,NULL; POLY(A) POLYMERASE CID (PAP)-RELATED,,CUFF.27270.2
(1719 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC70820 874 0.0
gnl|LJGI|TC75046 70 5e-11
gnl|LJGI|DC593013 54 3e-06
>gnl|LJGI|TC70820
Length = 723
Score = 874 bits (441), Expect = 0.0
Identities = 450/453 (99%)
Strand = Plus / Plus
Query: 1267 aaaaaagttgcacaaaatgcacgtgcttctttccctccctcatggcaaagctctcagggt 1326
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 aaaaaagttgcacaaaatgcacgtgcttctttccctccctcatggcaaagctctcagggt 60
Query: 1327 ggtgttcagtcattgaatcaagaagcagtggctccaaatccttgggggagatcattccct 1386
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 ggtgttcagtcattgaatcaagaagcagtggctccaaatccttgggggagatcattccct 120
Query: 1387 caaaggaagaggccagacaaaccaccctcctcaacagggccactacctccaagagagaag 1446
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 caaaggaagaggccagacaaaccaccctcctcaacagggccactacctccaagagagaag 180
Query: 1447 ccatgccagcaaccgcaaccttcctcaacaggggcactacctccaagagcgatcccatac 1506
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 ccatgccagcaaccgcaaccttcctcaacaggggcactacctccaagagcgatcccatac 240
Query: 1507 cagccacctgtgcataatggtctaggggcagttccttctcctttcacctcacaacccata 1566
||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 241 cagccacctgtgcataatggtctagggacagttccttctcctttcacctcacaacccata 300
Query: 1567 gtttctggtggtcttgtttcatcacaaagctctcggggtggtgttcagtcattgaatcaa 1626
||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 301 gtttctggtggtcttgtttcatcaccaagctctcggggtggtgttcagtcattgaatcaa 360
Query: 1627 gaagcagtggctccaatacctcggggcagatcattccctcaaaggaagaggccagaccac 1686
|||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 361 gaagcagtggctccaatacctcggggcagatcattccctccaaggaagaggccagaccac 420
Query: 1687 ccacctccctcagaagggccactgcctccaaag 1719
|||||||||||||||||||||||||||||||||
Sbjct: 421 ccacctccctcagaagggccactgcctccaaag 453
>gnl|LJGI|TC75046
Length = 505
Score = 69.9 bits (35), Expect = 5e-11
Identities = 56/63 (88%)
Strand = Plus / Plus
Query: 1323 gggtggtgttcagtcattgaatcaagaagcagtggctccaaatccttgggggagatcatt 1382
|||||||||| ||||||| ||||||||||| | ||||||||||||||||| |||||||
Sbjct: 206 gggtggtgttgagtcattacatcaagaagcactagctccaaatccttggggtggatcatt 265
Query: 1383 ccc 1385
|||
Sbjct: 266 ccc 268
Score = 61.9 bits (31), Expect = 1e-08
Identities = 37/39 (94%)
Strand = Plus / Plus
Query: 1270 aaagttgcacaaaatgcacgtgcttctttccctccctca 1308
||||||||||| ||||||| |||||||||||||||||||
Sbjct: 9 aaagttgcacataatgcacatgcttctttccctccctca 47
Score = 61.9 bits (31), Expect = 1e-08
Identities = 43/47 (91%)
Strand = Plus / Plus
Query: 1516 gtgcataatggtctaggggcagttccttctcctttcacctcacaacc 1562
|||||| |||||| ||||| |||||||||||||||||||| ||||||
Sbjct: 93 gtgcatcatggtccaggggtagttccttctcctttcaccttacaacc 139
>gnl|LJGI|DC593013
Length = 606
Score = 54.0 bits (27), Expect = 3e-06
Identities = 27/27 (100%)
Strand = Plus / Plus
Query: 745 cagacatgcaatcctcctatattacct 771
|||||||||||||||||||||||||||
Sbjct: 580 cagacatgcaatcctcctatattacct 606