Miyakogusa Predicted Gene

Lj1g3v1374520.1
Show Alignment:  

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj1g3v1374520.1 Non Chatacterized Hit- tr|K4D8F5|K4D8F5_SOLLC
Uncharacterized protein OS=Solanum lycopersicum
GN=Sol,49.18,0.00000001,seg,NULL,59937_g.1
         (477 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|TC70820                                                      323   6e-88
gnl|LJGI|TC75046                                                       62   3e-09

>gnl|LJGI|TC70820 
          Length = 723

 Score =  323 bits (163), Expect = 6e-88
 Identities = 172/175 (98%)
 Strand = Plus / Plus

                                                                       
Query: 303 aagctctcagggtggtgttcagtcattgaatcaagaagcagtggctccaatacctcgggg 362
           |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 327 aagctctcggggtggtgttcagtcattgaatcaagaagcagtggctccaatacctcgggg 386

                                                                       
Query: 363 cagatcattccctcaaaggaagaggccagaccacccacctccctcagaagggccactgcc 422
           |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 387 cagatcattccctccaaggaagaggccagaccacccacctccctcagaagggccactgcc 446

                                                                  
Query: 423 tccaaagaagaggccagaccaccgcataatgcatgatggctctagtcataaataa 477
           |||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 447 tccaaagaagaggccagacccccgcataatgcatgatggctctagtcataaataa 501



 Score =  254 bits (128), Expect = 4e-67
 Identities = 161/172 (93%)
 Strand = Plus / Plus

                                                                       
Query: 256 aaaaaagttgcacaaaatgcacgtgcttctttccctccctcatggcaaagctctcagggt 315
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1   aaaaaagttgcacaaaatgcacgtgcttctttccctccctcatggcaaagctctcagggt 60

                                                                       
Query: 316 ggtgttcagtcattgaatcaagaagcagtggctccaatacctcggggcagatcattccct 375
           |||||||||||||||||||||||||||||||||||||  ||| |||| ||||||||||||
Sbjct: 61  ggtgttcagtcattgaatcaagaagcagtggctccaaatccttgggggagatcattccct 120

                                                               
Query: 376 caaaggaagaggccagaccacccacctccctcagaagggccactgcctccaa 427
           |||||||||||||||||| | |||||  |||||  ||||||||| |||||||
Sbjct: 121 caaaggaagaggccagacaaaccaccctcctcaacagggccactacctccaa 172


>gnl|LJGI|TC75046 
          Length = 505

 Score = 61.9 bits (31), Expect = 3e-09
 Identities = 37/39 (94%)
 Strand = Plus / Plus

                                                  
Query: 259 aaagttgcacaaaatgcacgtgcttctttccctccctca 297
           ||||||||||| ||||||| |||||||||||||||||||
Sbjct: 9   aaagttgcacataatgcacatgcttctttccctccctca 47