Miyakogusa Predicted Gene
- Lj1g3v1363200.2
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj1g3v1363200.2 Non Chatacterized Hit- tr|A5BP85|A5BP85_VITVI
Putative uncharacterized protein OS=Vitis vinifera
GN=,34.66,0.00000000000005,CBS,Cystathionine beta-synthase, core;
seg,NULL; no description,Aldolase-type TIM barrel;
CBS-domain,CUFF.27182.2
(1344 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC58532 1782 0.0
gnl|LJGI|TC69140 weakly similar to UniRef100_A7PKQ0 Cluster: Chr... 605 e-172
gnl|LJGI|TC78329 similar to UniRef100_A7PKQ0 Cluster: Chromosome... 210 2e-53
gnl|LJGI|GO005067 135 8e-31
gnl|LJGI|TC76524 127 2e-28
>gnl|LJGI|TC58532
Length = 1061
Score = 1782 bits (899), Expect = 0.0
Identities = 899/899 (100%)
Strand = Plus / Plus
Query: 1 atgaagaagaccaaacaacaacgctcttccaagaaatcccttcccgccgaaaatggaacc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 163 atgaagaagaccaaacaacaacgctcttccaagaaatcccttcccgccgaaaatggaacc 222
Query: 61 aacgccaaagcttcctctccgccttcgcaacccgatgaaggaggagaaaggacggtgaag 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 223 aacgccaaagcttcctctccgccttcgcaacccgatgaaggaggagaaaggacggtgaag 282
Query: 121 aagcttcgattatcgaaggcgctcaccattcctgaggggacaacggtttccgaagcatgt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 283 aagcttcgattatcgaaggcgctcaccattcctgaggggacaacggtttccgaagcatgt 342
Query: 181 cggagaatggccgctcgtcgcgttggcgctgttttgttgacggattccaatgctctgctt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 343 cggagaatggccgctcgtcgcgttggcgctgttttgttgacggattccaatgctctgctt 402
Query: 241 tcagggattctcacggataaggatgttggtgctagagttgtggctgaggggttgcggccg 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 403 tcagggattctcacggataaggatgttggtgctagagttgtggctgaggggttgcggccg 462
Query: 301 gaggagacgacggtttcgaaggtgatgacgaggaatcctatctttgtgacatcggatgcg 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 463 gaggagacgacggtttcgaaggtgatgacgaggaatcctatctttgtgacatcggatgcg 522
Query: 361 ctggctattgaagcgcttcagaaaatggttcagggtaaattcaggcacctccctgttgtg 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 523 ctggctattgaagcgcttcagaaaatggttcagggtaaattcaggcacctccctgttgtg 582
Query: 421 gaaaatggtgaagtcattgccatgctggatattgccaaatgcctttatgatgccatatct 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 583 gaaaatggtgaagtcattgccatgctggatattgccaaatgcctttatgatgccatatct 642
Query: 481 agggtggagaaggctgctcaacaagggagtgccattgctgccgcagttgatggggtcgaa 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 643 agggtggagaaggctgctcaacaagggagtgccattgctgccgcagttgatggggtcgaa 702
Query: 541 aatcagcgtagtagtaatatagctccaaatgctttaattgaaacattgagggagcgcatg 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 703 aatcagcgtagtagtaatatagctccaaatgctttaattgaaacattgagggagcgcatg 762
Query: 601 ttcaagccttcgctgtcaactatactgggtgaaaatataaaggtcgctattgcatcagca 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 763 ttcaagccttcgctgtcaactatactgggtgaaaatataaaggtcgctattgcatcagca 822
Query: 661 tcagacactgtctatgtagctgcaataaagatgcgggagttgcgtgttaattcagctgtg 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 823 tcagacactgtctatgtagctgcaataaagatgcgggagttgcgtgttaattcagctgtg 882
Query: 721 attgtgatcgataccaagattcaggggatactgacttcaaaagacatcctcatgcgtgtt 780
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 883 attgtgatcgataccaagattcaggggatactgacttcaaaagacatcctcatgcgtgtt 942
Query: 781 gtggctcaaaatctttcccctgagcagactctagtggagaaggtaatgactccaaaccca 840
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 943 gtggctcaaaatctttcccctgagcagactctagtggagaaggtaatgactccaaaccca 1002
Query: 841 gaatgtgcatcactagacacaacaattcttgatgcactgcatatgatgcatgatgggaa 899
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1003 gaatgtgcatcactagacacaacaattcttgatgcactgcatatgatgcatgatgggaa 1061
>gnl|LJGI|TC69140 weakly similar to UniRef100_A7PKQ0 Cluster: Chromosome chr7
scaffold_20, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome chr7 scaffold_20, whole genome
shotgun sequence - Vitis vinifera (Grape), partial (32%)
Length = 1003
Score = 605 bits (305), Expect = e-172
Identities = 320/325 (98%)
Strand = Plus / Plus
Query: 1020 ggcaagcacagttatgcaaaaattttgggactcagcttttgctcttgagccgcctgaaga 1079
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 ggcaagcacagttatgcaaaaattttgggactcagcttttgctcttgagccgcctgaaga 60
Query: 1080 ttacgatactcgcagtgaagtctctggacaactgaccttagatggtgcagataccaacaa 1139
|||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 61 ttacgatactcgcagtgaagtctctggacaactgaccttagatggtttttataccaacaa 120
Query: 1140 gtctacatatcaatctgctggttttggaaattcatttacttttaaatttgaggatcctaa 1199
|||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 121 gtctacatatcaatctgctggttttggaaatttatttacttttaaatttgaggatcctaa 180
Query: 1200 tggtcatgggcatcgattcagctgtggtgcagaacatcaagatgagcttgtctccgctgt 1259
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 tggtcatgggcatcgattcagctgtggtgcagaacatcaagatgagcttgtctccgctgt 240
Query: 1260 gatgcaaagaattggtcaaattaatgatggagaaggcccaaaaatactgtatgaagatga 1319
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 gatgcaaagaattggtcaaattaatgatggagaaggcccaaaaatactgtatgaagatga 300
Query: 1320 tgaaggtgataaaattattatttca 1344
|||||||||||||||||||||||||
Sbjct: 301 tgaaggtgataaaattattatttca 325
>gnl|LJGI|TC78329 similar to UniRef100_A7PKQ0 Cluster: Chromosome chr7 scaffold_20,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr7 scaffold_20, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (33%)
Length = 1105
Score = 210 bits (106), Expect = 2e-53
Identities = 179/202 (88%), Gaps = 1/202 (0%)
Strand = Plus / Plus
Query: 905 tacatcttcctgtggtggacaaagatggaaatgttgctgcctgtgtggatgttttgcaga 964
|||||||||| ||| | |||| ||||||| |||||||||| |||||||||||||||||||
Sbjct: 4 tacatcttccagtg-tagacagagatggatatgttgctgcttgtgtggatgttttgcaga 62
Query: 965 taactcatgctgcaatttctctggttgagagtagctcaggacctgttaatgatgtggcaa 1024
||||||||||||||||||| |||||||||||||||| ||| ||||||||||| ||||||
Sbjct: 63 taactcatgctgcaatttccatggttgagagtagctctggagctgttaatgatatggcaa 122
Query: 1025 gcacagttatgcaaaaattttgggactcagcttttgctcttgagccgcctgaagattacg 1084
||| |||||||||||||||||||||||||||||||||| ||||| || ||||||| |
Sbjct: 123 atacaattatgcaaaaattttgggactcagcttttgctctagagccaccagaagattctg 182
Query: 1085 atactcgcagtgaagtctctgg 1106
|||| | |||||||| |||||
Sbjct: 183 atacgcatagtgaagtttctgg 204
>gnl|LJGI|GO005067
Length = 245
Score = 135 bits (68), Expect = 8e-31
Identities = 131/152 (86%)
Strand = Plus / Plus
Query: 332 ggaatcctatctttgtgacatcggatgcgctggctattgaagcgcttcagaaaatggttc 391
|||||||||| ||||| |||| ||| ||| || |||||||| |||||||| ||||| |
Sbjct: 90 ggaatcctatatttgttgcatcagatacgcgagccattgaagcccttcagaagatggtcc 149
Query: 392 agggtaaattcaggcacctccctgttgtggaaaatggtgaagtcattgccatgctggata 451
| ||||||||||| ||||||||||||||||||||||||||||| || ||||| || ||||
Sbjct: 150 aaggtaaattcagacacctccctgttgtggaaaatggtgaagtaatcgccatactagata 209
Query: 452 ttgccaaatgcctttatgatgccatatctagg 483
|| ||||||| || |||||||||||| |||||
Sbjct: 210 ttaccaaatgtctctatgatgccataactagg 241
>gnl|LJGI|TC76524
Length = 784
Score = 127 bits (64), Expect = 2e-28
Identities = 168/202 (83%), Gaps = 3/202 (1%)
Strand = Plus / Plus
Query: 485 tggagaaggctgctcaacaagggagtgccattgctgccgcagttgatggggtcgaaaatc 544
|||||||||||||| | || || |||||||||||||| |||||||| |||| ||| |
Sbjct: 582 tggagaaggctgctgagcagggaagtgccattgctgcggcagttgaaggggcggaacgcc 641
Query: 545 agcgtagtagtaatata---gctccaaatgctttaattgaaacattgagggagcgcatgt 601
|||| |||| ||| | ||||||||||| || || ||||| ||||| ||||||||||
Sbjct: 642 agcggggtagcaatgcatctgctccaaatgccttgatagaaaccttgagagagcgcatgt 701
Query: 602 tcaagccttcgctgtcaactatactgggtgaaaatataaaggtcgctattgcatcagcat 661
|||||||||| |||||||||||| | ||||| |||| ||||| |||||||||||||||
Sbjct: 702 tcaagccttccctgtcaactataattggtgacaatacaaaggctgctattgcatcagcag 761
Query: 662 cagacactgtctatgtagctgc 683
|||| ||||||||||||||||
Sbjct: 762 cagatcctgtctatgtagctgc 783
Score = 56.0 bits (28), Expect = 6e-07
Identities = 61/72 (84%)
Strand = Plus / Plus
Query: 163 acggtttccgaagcatgtcggagaatggccgctcgtcgcgttggcgctgttttgttgacg 222
|||||||| ||||| ||||| |||||||| || || || |||| ||||||||||||||
Sbjct: 348 acggtttctgaagcgtgtcgaagaatggcagcgcgacgtgttgatgctgttttgttgact 407
Query: 223 gattccaatgct 234
||||| ||||||
Sbjct: 408 gattctaatgct 419