Miyakogusa Predicted Gene
- Lj1g3v1357950.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj1g3v1357950.1 tr|Q56H85|Q56H85_PEA Amino acid transporter
(Fragment) OS=Pisum sativum GN=AAP2 PE=2 SV=1,72.77,0,seg,NULL;
PROKAR_LIPOPROTEIN,NULL; Aa_trans,Amino acid transporter,
transmembrane; SUBFAMILY NOT NAM,CUFF.27243.1
(609 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC63583 similar to UniRef100_Q93X15 Cluster: Amino acid... 599 e-171
gnl|LJGI|BP057409 similar to UniRef100_Q93X15 Cluster: Amino aci... 355 2e-97
gnl|LJGI|TC61883 similar to UniRef100_Q93X14 Cluster: Amino acid... 139 2e-32
gnl|LJGI|TC77175 similar to UniRef100_Q5ZF80 Cluster: Amino acid... 115 3e-25
>gnl|LJGI|TC63583 similar to UniRef100_Q93X15 Cluster: Amino acid permease AAP1; n=1;
Vicia faba var. minor|Rep: Amino acid permease AAP1 -
Vicia faba var. minor, partial (72%)
Length = 1233
Score = 599 bits (302), Expect = e-171
Identities = 536/612 (87%), Gaps = 4/612 (0%)
Strand = Plus / Plus
Query: 1 atgaagaaggccacccatataagcattggagttatcacagcattttacatgctttgtggg 60
||||||||||| || | ||||| ||||||||||||||| ||||||||||||||||||||
Sbjct: 456 atgaagaaggctacaaagataagtattggagttatcacaacattttacatgctttgtggg 515
Query: 61 tgctttggctatgctgcttttggagacacagcacctggtaatctgctaactggatttggc 120
|||| ||||||||||| |||||||||| |||||||||| |||||||| ||||||||||||
Sbjct: 516 tgctctggctatgctggttttggagacgcagcacctgggaatctgctcactggatttggc 575
Query: 121 tactccaaatcatattggcttatagacattgctaatgcagcaattgtagttcacatgttt 180
||||| ||| ||||||||||||||||||||||||||||||| |||| | ||||| | |
Sbjct: 576 tactctaaagcatattggcttatagacattgctaatgcagccattgcaattcaccttgtg 635
Query: 181 ggagcataccaagtgtattcccaacccctctttgcatttgttgagaaagaggtagtaaaa 240
|||||||||||||||||| |||||||||||||||||||||||||||||| | ||| |||
Sbjct: 636 ggagcataccaagtgtatgcccaacccctctttgcatttgttgagaaagggacagtgaaa 695
Query: 241 aggtggccattagttaacaaggaatacaagattccaattcctggttgt---gctccttat 297
|||| || |||||||||| ||||||| |||||| | |||||| || ||||| ||
Sbjct: 696 aggtttcccaaagttaacaagcaatacaaaattccattacctggtggttttgctccctac 755
Query: 298 aatctaaacttgtttagattggtttggagaacaatgtttgttatctcaaccacttttata 357
||||| || || || |||||| |||||||||| | ||||||||||||||||||||||||
Sbjct: 756 aatctgaatttatt-agattgatttggagaaccttatttgttatctcaaccacttttata 814
Query: 358 gcaatgttgattccattcttcaatgacgttatggggatccttggagctctgaatttttgg 417
|||||||||||||||||||||||||||||| ||||| | |||||||| || ||||||
Sbjct: 815 gcaatgttgattccattcttcaatgacgttttggggttgcttggagcattgggattttgg 874
Query: 418 cctttaacagtttattacccagtggagatgtatatcaaacagaagaagatgccaaaatgg 477
|||||||||||||||| |||||||||||||||||||| ||| |||||||| |||||||||
Sbjct: 875 cctttaacagtttatttcccagtggagatgtatatcacacaaaagaagatcccaaaatgg 934
Query: 478 agtaggagatggatttttctgcaaattataagtgtagtttgccttgtagtgtcagcagtg 537
||||||||||||||| |||||||||||||||||| || || |||||||| ||||| ||
Sbjct: 935 agtaggagatggattggtctgcaaattataagtgttgtctgtcttgtagtatcagctgtt 994
Query: 538 tctgttgttggctcagtggctagtgtagttcttgacctgaagaagtacaaaccttttgtc 597
||||| |||||||||||||||||| |||| ||||||| || || |||||||||||||||
Sbjct: 995 tctgtcgttggctcagtggctagtatagtggttgacctaaaaaaatacaaaccttttgtc 1054
Query: 598 tcaaacttttaa 609
|||||||||||
Sbjct: 1055 acaaacttttaa 1066
>gnl|LJGI|BP057409 similar to UniRef100_Q93X15 Cluster: Amino acid permease AAP1; n=1;
Vicia faba var. minor|Rep: Amino acid permease AAP1 -
Vicia faba var. minor, partial (20%)
Length = 477
Score = 355 bits (179), Expect = 2e-97
Identities = 271/302 (89%)
Strand = Plus / Minus
Query: 308 tgtttagattggtttggagaacaatgtttgttatctcaaccacttttatagcaatgttga 367
||||||||||||||||||||||| |||||||||||||||||||||| |||||||||||||
Sbjct: 477 tgtttagattggtttggagaacactgtttgttatctcaaccactttcatagcaatgttga 418
Query: 368 ttccattcttcaatgacgttatggggatccttggagctctgaatttttggcctttaacag 427
|||||||||||||||||||| |||||||||||||| | ||||||||||||||||| || |
Sbjct: 417 ttccattcttcaatgacgttttggggatccttggatcactgaatttttggcctttgactg 358
Query: 428 tttattacccagtggagatgtatatcaaacagaagaagatgccaaaatggagtaggagat 487
|||||| |||||||||||||||||| || ||||||||||| || |||||||||||| ||
Sbjct: 357 tttatttcccagtggagatgtatataaagcagaagaagatcccnaaatggagtagggcat 298
Query: 488 ggatttttctgcaaattataagtgtagtttgccttgtagtgtcagcagtgtctgttgttg 547
||||| |||||||||||||||||||||||||||||||||||||| |||||| | |||
Sbjct: 297 ggattggtctgcaaattataagtgtagtttgccttgtagtgtcagttatgtctgctattg 238
Query: 548 gctcagtggctagtgtagttcttgacctgaagaagtacaaaccttttgtctcaaactttt 607
|||||||||| ||||||| |||||| | ||| ||||||||||| ||| |||||||||
Sbjct: 237 gctcagtggccagtgtagcgcttgacttaaaggtttacaaacctttcgtcacaaactttt 178
Query: 608 aa 609
||
Sbjct: 177 aa 176
>gnl|LJGI|TC61883 similar to UniRef100_Q93X14 Cluster: Amino acid permease AAP3; n=1;
Vicia faba var. minor|Rep: Amino acid permease AAP3 -
Vicia faba var. minor, partial (38%)
Length = 890
Score = 139 bits (70), Expect = 2e-32
Identities = 355/450 (78%)
Strand = Plus / Plus
Query: 43 ttttacatgctttgtgggtgctttggctatgctgcttttggagacacagcacctggtaat 102
||||| ||||||||||| ||| | ||||||||||||||||||||| |||||||||| ||
Sbjct: 7 ttttatatgctttgtggctgcatgggctatgctgcttttggagactcagcacctgggaac 66
Query: 103 ctgctaactggatttggctactccaaatcatattggcttatagacattgctaatgcagca 162
| || |||||||||||| | ||||| | |||||| |||| ||||||||||| || ||
Sbjct: 67 ttactcactggatttggcgtcaccaaagcttattggattattgacattgctaacgctgct 126
Query: 163 attgtagttcacatgtttggagcataccaagtgtattcccaacccctctttgcatttgtt 222
|| ||| ||||| | | |||||||||||||||||| ||||||||||||| || || ||
Sbjct: 127 atcgtaattcaccttgtgggagcataccaagtgtatgcccaacccctcttcgccttcatt 186
Query: 223 gagaaagaggtagtaaaaaggtggccattagttaacaaggaatacaagattccaattcct 282
|||||||||| || ||||| ||||| | || |||||| || ||| || ||| |||
Sbjct: 187 gagaaagaggcagcaaaaaaatggcccaaaattgacaagggattcaaagttaaaatacct 246
Query: 283 ggttgtgctccttataatctaaacttgtttagattggtttggagaacaatgtttgttatc 342
||| | | | || || | ||| | |||| || |||| ||| || |||||||||||
Sbjct: 247 ggtcttccatcctacaaccagaacatatttatgttagtttcgaggtcagtgtttgttatc 306
Query: 343 tcaaccacttttatagcaatgttgattccattcttcaatgacgttatggggatccttgga 402
|||||| | ||||||||| ||||||||||||||||||||||| |||| | |||||
Sbjct: 307 atcaccactctcatagcaatgctgattccattcttcaatgacgttctgggagtgattgga 366
Query: 403 gctctgaatttttggcctttaacagtttattacccagtggagatgtatatcaaacagaag 462
|| || |||||||||||||| ||||| | ||| |||||||||| |||| ||| |||
Sbjct: 367 gcactcgggttttggcctttaactgtttactttccattggagatgtacatcatacaaaag 426
Query: 463 aagatgccaaaatggagtaggagatggatt 492
||||| |||| |||||| | || |||||||
Sbjct: 427 aagatcccaagatggagcacgaaatggatt 456
>gnl|LJGI|TC77175 similar to UniRef100_Q5ZF80 Cluster: Amino acid permease; n=1;
Plantago major|Rep: Amino acid permease - Plantago major
(Common plantain), partial (74%)
Length = 695
Score = 115 bits (58), Expect = 3e-25
Identities = 154/186 (82%)
Strand = Plus / Plus
Query: 308 tgtttagattggtttggagaacaatgtttgttatctcaaccacttttatagcaatgttga 367
|||||||| |||||||||| ||| ||||||| || | ||||||| | || ||||||||
Sbjct: 171 tgtttagaatggtttggaggacactgtttgtgattttaaccactgtcttatcaatgttgc 230
Query: 368 ttccattcttcaatgacgttatggggatccttggagctctgaatttttggcctttaacag 427
||||||||||||||||| || |||| | ||||||| || ||||||||| ||||||
Sbjct: 231 ttccattcttcaatgacattgtgggagtgattggagcactagggttttggcctctaacag 290
Query: 428 tttattacccagtggagatgtatatcaaacagaagaagatgccaaaatggagtaggagat 487
|||| | |||||||||||||||||| |||| |||||| |||||||||||||| ||||
Sbjct: 291 tttactttccagtggagatgtatatcgcccagaggaagatcccaaaatggagtagcagat 350
Query: 488 ggattt 493
||||||
Sbjct: 351 ggattt 356