Miyakogusa Predicted Gene

Lj1g3v1353700.1
Show Alignment:  

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj1g3v1353700.1 tr|I1JXZ9|I1JXZ9_SOYBN DNA polymerase OS=Glycine
max PE=3 SV=1,91.62,0,DNA POLYMERASE DELTA CATALYTIC SUBUNIT,NULL; DNA
POLYMERASE CATALYTIC SUBUNIT,NULL; DNA/RNA polymera,CUFF.27148.1
         (1074 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|AV780629 homologue to UniRef100_A7QST5 Cluster: DNA pol...   321   5e-87

>gnl|LJGI|AV780629 homologue to UniRef100_A7QST5 Cluster: DNA polymerase; n=1; Vitis
            vinifera|Rep: DNA polymerase - Vitis vinifera (Grape),
            partial (6%)
          Length = 512

 Score =  321 bits (162), Expect = 5e-87
 Identities = 168/170 (98%)
 Strand = Plus / Minus

                                                                        
Query: 905  aaggaagggaacctgaactatactgtaaaacagtagcacaagtgtctgacctagagatgc 964
            ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 511  aaggaagggaacctgaactatactgtaaaacagtagctcaagtgtctgacctagagatgc 452

                                                                        
Query: 965  tttttgggaggttgtggacacaatgtcaggagtgccaaggttcacttcatcaagatgttc 1024
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 451  tttttgggaggttgtggacacaatgtcaggagtgccaaggttcacttcatcaagatgttc 392

                                                              
Query: 1025 tatgcacaagccgggattgtcccattttttatcgacgtaaaaaagcgcag 1074
            |||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 391  tatgcacaagtcgggattgtcccattttttatcgacgtaaaaaagcgcag 342