Miyakogusa Predicted Gene
- Lj1g3v1353690.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj1g3v1353690.1 tr|G7JC45|G7JC45_MEDTR E3 ubiquitin-protein
ligase mib1 OS=Medicago truncatula GN=MTR_3g096520 PE=4
,81.35,0,Copine,Copine; zf-C3HC4_3,NULL; vWA-like,NULL;
RING/U-box,NULL; no description,Zinc finger, RING/FYV,CUFF.27143.1
(1257 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC78635 similar to UniRef100_A7QST8 Cluster: Chromosome... 2454 0.0
gnl|LJGI|GO031905 similar to UniRef100_A7QST8 Cluster: Chromosom... 311 6e-84
gnl|LJGI|TC61685 similar to UniRef100_Q6YYC5 Cluster: Copine I-l... 64 2e-09
>gnl|LJGI|TC78635 similar to UniRef100_A7QST8 Cluster: Chromosome chr4 scaffold_162,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr4 scaffold_162, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (76%)
Length = 1554
Score = 2454 bits (1238), Expect = 0.0
Identities = 1255/1260 (99%), Gaps = 3/1260 (0%)
Strand = Plus / Plus
Query: 1 atgggaaatgcagagtcaatggatgaatctcaagataatttttaccaacaatccccttat 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 91 atgggaaatgcagagtcaatggatgaatctcaagataatttttaccaacaatccccttat 150
Query: 61 tatgctgggagctcagttgtggataacagctatcatcaatcctcttcttatgctgggagt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 151 tatgctgggagctcagttgtggataacagctatcatcaatcctcttcttatgctgggagt 210
Query: 121 ttggatgatactactattactacccataatcaacactcttctaatgctgggagatctgtg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 211 ttggatgatactactattactacccataatcaacactcttctaatgctgggagatctgtg 270
Query: 181 aatactcgccatcagcaatctaaacacatagctgacaatttcagctcattggatcaggtt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 271 aatactcgccatcagcaatctaaacacatagctgacaatttcagctcattggatcaggtt 330
Query: 241 gtttctgctctcagagaagctggtctggaatcttcaaatttgatacttggaattgacttc 300
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 331 gtttctgctctcagagaagctggtctggaatcttcaaatttgatacttggtattgacttc 390
Query: 301 accaaaagcaatgagtggacaggcaagcactcgttccacaggaaaagccttcatcgtatt 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 391 accaaaagcaatgagtggacaggcaagcactcgttccacaggaaaagccttcatcgtatt 450
Query: 361 ggaaacactcctaatccgtatgagcaagcaatctccatcattggccgtactctgtcttct 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 451 ggaaacactcctaatccgtatgagcaagcaatctccatcattggccgtactctgtcttct 510
Query: 421 tttgatgaagataatctcataccgtgttttggatttggggatgcttctacacatgatcat 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 511 tttgatgaagataatctcataccgtgttttggatttggggatgcttctacacatgatcat 570
Query: 481 aatgtgttcagcttttataatggtgatagattttgtcaaggttttgaggaagtactttca 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 571 aatgtgttcagcttttataatggtgatagattttgtcaaggttttgaggaagtactttca 630
Query: 541 cgctacagacagattgttccacacctgaaattgtcaggtccaacatcatttgcccctgta 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 631 cgctacagacagattgttccacacctgaaattgtcaggtccaacatcatttgcccctgta 690
Query: 601 attgatgcagccattgacattgtggaaaggaacaatggtcaatatcatgttcttgtcatt 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 691 attgatgcagccattgacattgtggaaaggaacaatggtcaatatcatgttcttgtcatt 750
Query: 661 attgctgatggacaggttactagaaatccagatacaccacatggaaagcatagtccacaa 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 751 attgctgatggacaggttactagaaatccagatacaccacatggaaagcatagtccacaa 810
Query: 721 gaacaagcaaccattaattctatcattgctgcaagtcactatcctctctcaattattttg 780
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 811 gaacaagcaaccattaattctatcattgctgcaagtcactatcctctctcaattattttg 870
Query: 781 gttggagttggagatggaccatgggatgagatgaagaattttgatgataacattactggg 840
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 871 gttggagttggagatggaccatgggatgagatgaagaattttgatgataacattactggg 930
Query: 841 cgcttatttgataactttcagtttgtgaacttcacaaagatcatgtctgagaacacagaa 900
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 931 cgcttatttgataactttcagtttgtgaacttcacaaagatcatgtctgagaacacagaa 990
Query: 901 gcatcaaataaggaagcagaatttgcacttgctgccctaatggaaattccatttcagtac 960
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 991 gcatcaaataaggaagcagaatttgcacttgctgccctaatggaaattccatttcagtac 1050
Query: 961 cgggcagcccaaaatatacaacttaccaa---agacccagatcattatcaacataaaagg 1017
||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 1051 cgggcagcccaaaatatacaacttaccaatagagacccagatcattatcaacataaaagg 1110
Query: 1018 cctctccctccacctaaggaagtaacagattatgataatgcagtcacagcaattccacac 1077
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1111 cctctccctccacctaaggaagtaacagattatgataatgcagtcacagcaattccacac 1170
Query: 1078 atggcaaactttgaatcagtagaaccaacagctccagatgttgtggaaccagtatgcccg 1137
||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1171 atgacaaactttgaatcagtagaaccaacagctccagatgttgtggaaccagtatgcccg 1230
Query: 1138 atttgcctaacgaacccgaaggatatggcttttggatgcggtcatacgacttgcaaggag 1197
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1231 atttgcctaacgaacccgaaggatatggcttttggatgcggtcatacgacttgcaaggag 1290
Query: 1198 tgtggtgcgactttatcatcatgccctatttgcaggcagcaaattacaactcgcctgaga 1257
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1291 tgtggtgcgactttatcatcatgccctatttgcaggcagcaaattacaactcgcctgaga 1350
>gnl|LJGI|GO031905 similar to UniRef100_A7QST8 Cluster: Chromosome chr4 scaffold_162,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr4 scaffold_162, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (51%)
Length = 663
Score = 311 bits (157), Expect = 6e-84
Identities = 286/329 (86%)
Strand = Plus / Plus
Query: 343 aaaagccttcatcgtattggaaacactcctaatccgtatgagcaagcaatctccatcatt 402
|||||||| |||| |||||| | |||||||||||| ||||||||||| ||||| ||||||
Sbjct: 46 aaaagcctccatcatattggtagcactcctaatccatatgagcaagctatctctatcatt 105
Query: 403 ggccgtactctgtcttcttttgatgaagataatctcataccgtgttttggatttggggat 462
||||||||||| ||||| ||||||||||||||||| ||||| |||||||||||||| |||
Sbjct: 106 ggccgtactctctcttcgtttgatgaagataatctgataccatgttttggatttggtgat 165
Query: 463 gcttctacacatgatcataatgtgttcagcttttataatggtgatagattttgtcaaggt 522
|| |||||||||||||| ||||| |||||||||| | || | || | | |||| | |||
Sbjct: 166 gcatctacacatgatcagaatgtcttcagcttttttcctgatcatcgctgttgtaatggt 225
Query: 523 tttgaggaagtactttcacgctacagacagattgttccacacctgaaattgtcaggtcca 582
|| ||||||| |||| ||||||||||| ||||||||||| | | |||||||||||||||
Sbjct: 226 ttcgaggaagcacttgcacgctacagagagattgttccatgcttaaaattgtcaggtcca 285
Query: 583 acatcatttgcccctgtaattgatgcagccattgacattgtggaaaggaacaatggtcaa 642
|||||||||||||| ||||| || ||||| ||| ||| ||||||||| | ||| ||||||
Sbjct: 286 acatcatttgccccagtaatcgacgcagcaattaacactgtggaaagaagcaacggtcaa 345
Query: 643 tatcatgttcttgtcattattgctgatgg 671
|||||||||||||| ||||||||||||||
Sbjct: 346 tatcatgttcttgtgattattgctgatgg 374
Score = 192 bits (97), Expect = 4e-48
Identities = 211/249 (84%)
Strand = Plus / Plus
Query: 711 tagtccacaagaacaagcaaccattaattctatcattgctgcaagtcactatcctctctc 770
|||||| |||||||||||||| || ||||||||| |||||||||||||||||||||||
Sbjct: 381 tagtccgcaagaacaagcaactgttcattctatcacagctgcaagtcactatcctctctc 440
Query: 771 aattattttggttggagttggagatggaccatgggatgagatgaagaattttgatgataa 830
|||| ||||||||||||| ||||||||||||||| ||| ||| | ||||||||||| |
Sbjct: 441 aattgttttggttggagtcggagatggaccatggaatgcaatgcataattttgatgacag 500
Query: 831 cattactgggcgcttatttgataactttcagtttgtgaacttcacaaagatcatgtctga 890
||| ||| ||| |||||||||||| ||||||||||| | |||||| || ||||||||
Sbjct: 501 catgcctgatcgcaaatttgataacttccagtttgtgaattacacaaatatgatgtctga 560
Query: 891 gaacacagaagcatcaaataaggaagcagaatttgcacttgctgccctaatggaaattcc 950
|||| ||| |||| || || ||| | | |||||||||||||||||| |||||||||||
Sbjct: 561 aaacaaagagacatccaagaaagaaaccgcatttgcacttgctgcccttatggaaattcc 620
Query: 951 atttcagta 959
| |||||||
Sbjct: 621 aattcagta 629
>gnl|LJGI|TC61685 similar to UniRef100_Q6YYC5 Cluster: Copine I-like protein; n=1;
Oryza sativa Japonica Group|Rep: Copine I-like protein -
Oryza sativa subsp. japonica (Rice), partial (77%)
Length = 1620
Score = 63.9 bits (32), Expect = 2e-09
Identities = 50/56 (89%)
Strand = Plus / Plus
Query: 772 attattttggttggagttggagatggaccatgggatgagatgaagaattttgatga 827
|||||||||||||||||||| |||||||| ||||| || ||||| || ||||||||
Sbjct: 793 attattttggttggagttggtgatggaccttgggaagacatgaaaaagtttgatga 848