Miyakogusa Predicted Gene
- Lj1g3v1329370.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj1g3v1329370.1 Non Chatacterized Hit- tr|I1KBK0|I1KBK0_SOYBN
Uncharacterized protein OS=Glycine max PE=4 SV=1,72.91,0,U-box,U box
domain; SUBFAMILY NOT NAMED,NULL; WDSAM1 PROTEIN,NULL; no
description,Zinc finger, RING/,CUFF.27127.1
(1221 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC81073 weakly similar to UniRef100_A7R3F8 Cluster: Chr... 1505 0.0
gnl|LJGI|TC64142 similar to UniRef100_A7R3F8 Cluster: Chromosome... 650 0.0
gnl|LJGI|FS331399 similar to UniRef100_A7R3F8 Cluster: Chromosom... 224 1e-57
>gnl|LJGI|TC81073 weakly similar to UniRef100_A7R3F8 Cluster: Chromosome chr4
scaffold_519, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome chr4 scaffold_519, whole genome
shotgun sequence - Vitis vinifera (Grape), partial (7%)
Length = 850
Score = 1505 bits (759), Expect = 0.0
Identities = 779/786 (99%), Gaps = 6/786 (0%)
Strand = Plus / Plus
Query: 442 ggaaaagaagatgctacttcttcaccctcaaaaaatcacatggaatttgcagaggtagca 501
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 ggaaaagaagatgctacttcttcaccctcaaaaaatcacatggaatttgcagaggtagca 60
Query: 502 ctatcttgcattgtaaaattgttgccacttgttagcttagagcctctgaacatgatcaaa 561
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 ctatcttgcattgtaaaattgttgccacttgttagcttagagcctctgaacatgatcaaa 120
Query: 562 gatgagtccaaattagcaacgttcctgcaactacttgaaaagggaactagctcaatcaag 621
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 gatgagtccaaattagcaacgttcctgcaactacttgaaaagggaactagctcaatcaag 180
Query: 622 actagtttgtgtcaagttatagaatccacagcggcaatatcacaaacagatggggtgcat 681
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 actagtttgtgtcaagttatagaatccacagcggcaatatcacaaacagatggggtgcat 240
Query: 682 cacatacttggaaactcccacaaactagtacaagagattgttctactaattcgccaaaac 741
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 cacatacttggaaactcccacaaactagtacaagagattgttctactaattcgccaaaac 300
Query: 742 tgcgatgaggtt------tcggtttcggtttcgaatgcagcaatcagagctatgtcagcg 795
|||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 tgcgatgaggtttcggtttcggtttcggtttcgaatgcagcaatcagagctatgtcagcg 360
Query: 796 ttatgctccatggtttctaacagagaaaatttggtgaaagcaggagcaatagaagcaatc 855
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 ttatgctccatggtttctaacagagaaaatttggtgaaagcaggagcaatagaagcaatc 420
Query: 856 atagcatacatttcagaaccaagagagaagaacttggctccacttgccatggtggcgatg 915
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 atagcatacatttcagaaccaagagagaagaacttggctccacttgccatggtggcgatg 480
Query: 916 aagaagcttgtggtgcttgagagtggcaaagaagcgttggtgaatcaccccagagggatt 975
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 481 aagaagcttgtggtgcttgagagtggcaaagaagcgttggtgaatcaccccagagggatt 540
Query: 976 gaaactctggtgaagatggttttcagagtgtgtaatcaagagtgcagtgagattgctgtt 1035
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 541 gaaactctggtgaagatggttttcagagtgtgtaatcaagagtgcagtgagattgctgtt 600
Query: 1036 ggggtgcttttgattgtttgttgtgattctgggcgtgccagagaagaagccattgaaggt 1095
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 601 ggggtgcttttgattgtttgttgtgattctgggcgtgccagagaagaagccattgaaggt 660
Query: 1096 ggggttttgactcagttgctgtttcttctgcagagtcagtgctgcatcaaaaccaaagcc 1155
|||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 661 ggggttttgactcagttgctgtttcttctgcagagtcagtgcggcatcaaaaccaaagcc 720
Query: 1156 aaggccagaatgctgctcaagttgcttagatccaagtggattgaagaaccaagaaaacag 1215
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 721 aaggccagaatgctgctcaagttgcttagatccaagtggattgaagaaccaagaaaacag 780
Query: 1216 gtgtag 1221
||||||
Sbjct: 781 gtgtag 786
>gnl|LJGI|TC64142 similar to UniRef100_A7R3F8 Cluster: Chromosome chr4 scaffold_519,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr4 scaffold_519, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (6%)
Length = 846
Score = 650 bits (328), Expect = 0.0
Identities = 328/328 (100%)
Strand = Plus / Plus
Query: 1 atgaacgaagctcaagtccaaataaccattcctcacttgttcagatgcccaatcagccta 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 519 atgaacgaagctcaagtccaaataaccattcctcacttgttcagatgcccaatcagccta 578
Query: 61 gacttgttcgaagatccagtgactttatgcacaggccacacctatgacagatcaagcata 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 579 gacttgttcgaagatccagtgactttatgcacaggccacacctatgacagatcaagcata 638
Query: 121 gagaaatggctctctgcaggtaacctcacatgccctgtaacaatgcagaagcttcatgat 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 639 gagaaatggctctctgcaggtaacctcacatgccctgtaacaatgcagaagcttcatgat 698
Query: 181 ccttccattgttcccaatcacaccctacgccatttaatcgatcagtggcttcaactgggt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 699 ccttccattgttcccaatcacaccctacgccatttaatcgatcagtggcttcaactgggt 758
Query: 241 ctccaatttgaccctggtaactctgcttctatagattacttagcttcactcaagcacaac 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 759 ctccaatttgaccctggtaactctgcttctatagattacttagcttcactcaagcacaac 818
Query: 301 cttgaatcaccagaagccactttacaaa 328
||||||||||||||||||||||||||||
Sbjct: 819 cttgaatcaccagaagccactttacaaa 846
>gnl|LJGI|FS331399 similar to UniRef100_A7R3F8 Cluster: Chromosome chr4 scaffold_519,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr4 scaffold_519, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (9%)
Length = 757
Score = 224 bits (113), Expect = 1e-57
Identities = 209/241 (86%)
Strand = Plus / Plus
Query: 26 ccattcctcacttgttcagatgcccaatcagcctagacttgttcgaagatccagtgactt 85
|||||||| |||| ||||||||||| ||||| ||||||||||| ||||||| || ||||
Sbjct: 398 ccattccttacttattcagatgccccatcagtttagacttgttccaagatcctgtaactt 457
Query: 86 tatgcacaggccacacctatgacagatcaagcatagagaaatggctctctgcaggtaacc 145
||||||||||||| || |||||||| |||| ||||| ||||||| |||| || ||||
Sbjct: 458 tatgcacaggccaaacatatgacaggtcaaatatagaacaatggctggctgctggaaacc 517
Query: 146 tcacatgccctgtaacaatgcagaagcttcatgatccttccattgttcccaatcacaccc 205
|||||||||| || ||||||||||||||||||||||| | ||||||||| |||||||| |
Sbjct: 518 tcacatgcccagtcacaatgcagaagcttcatgatccattcattgttccgaatcacacac 577
Query: 206 tacgccatttaatcgatcagtggcttcaactgggtctccaatttgaccctggtaactctg 265
| ||||| || || ||||||||||||||||| |||| ||||||||| |||||||||||||
Sbjct: 578 ttcgccacttgattgatcagtggcttcaactcggtccccaatttgaacctggtaactctg 637
Query: 266 c 266
|
Sbjct: 638 c 638