Miyakogusa Predicted Gene

Lj1g3v1318310.1
Show Alignment:  

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj1g3v1318310.1 Non Chatacterized Hit- tr|I3SY87|I3SY87_LOTJA
Uncharacterized protein OS=Lotus japonicus PE=2
SV=1,95.24,0.0000000000001,
,NODE_69252_length_131_cov_115.801529.path1.1
         (126 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|TC76195 similar to UniRef100_Q941D6 Cluster: Histone de...   250   2e-66
gnl|LJGI|TC74285 similar to UniRef100_O82314 Cluster: UPF0082 pr...    72   8e-13

>gnl|LJGI|TC76195 similar to UniRef100_Q941D6 Cluster: Histone deacetylase 14; n=1;
           Arabidopsis thaliana|Rep: Histone deacetylase 14 -
           Arabidopsis thaliana (Mouse-ear cress), partial (36%)
          Length = 626

 Score =  250 bits (126), Expect = 2e-66
 Identities = 126/126 (100%)
 Strand = Plus / Plus

                                                                       
Query: 1   atggatcaagctatggagaagggacttattttaattgagggttctggaccaacatatgct 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 425 atggatcaagctatggagaagggacttattttaattgagggttctggaccaacatatgct 484

                                                                       
Query: 61  acttccactaccttccaggagtcaatagttgcagctggtgctggattagccttagttgat 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 485 acttccactaccttccaggagtcaatagttgcagctggtgctggattagccttagttgat 544

                 
Query: 121 tcagtg 126
           ||||||
Sbjct: 545 tcagtg 550


>gnl|LJGI|TC74285 similar to UniRef100_O82314 Cluster: UPF0082 protein At2g25830;
           n=1; Arabidopsis thaliana|Rep: UPF0082 protein At2g25830
           - Arabidopsis thaliana (Mouse-ear cress), partial (9%)
          Length = 576

 Score = 71.9 bits (36), Expect = 8e-13
 Identities = 51/56 (91%)
 Strand = Plus / Plus

                                                                   
Query: 1   atggatcaagctatggagaagggacttattttaattgagggttctggaccaacata 56
           |||||||||||||||||||| || |||||||| ||||| ||||||||||| |||||
Sbjct: 111 atggatcaagctatggagaatggccttattttcattgatggttctggaccgacata 166