Miyakogusa Predicted Gene

Lj1g3v1318290.1
Show Alignment:  

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj1g3v1318290.1 Non Chatacterized Hit- tr|I3SY87|I3SY87_LOTJA
Uncharacterized protein OS=Lotus japonicus PE=2 SV=1,100,0,seg,NULL;
Arginase/deacetylase,NULL; Hist_deacetyl,Histone deacetylase domain;
HDASUPER,Histone deac,NODE_26479_length_899_cov_104.684090.path1.1
         (648 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|TC68958 similar to UniRef100_Q941D6 Cluster: Histone de...   686   0.0  

>gnl|LJGI|TC68958 similar to UniRef100_Q941D6 Cluster: Histone deacetylase 14; n=1;
           Arabidopsis thaliana|Rep: Histone deacetylase 14 -
           Arabidopsis thaliana (Mouse-ear cress), partial (27%)
          Length = 540

 Score =  686 bits (346), Expect = 0.0
 Identities = 346/346 (100%)
 Strand = Plus / Plus

                                                                       
Query: 303 atgtgctcaaagatttaagccagacatcatccttgtttctgccgggtatgatggtcacgt 362
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1   atgtgctcaaagatttaagccagacatcatccttgtttctgccgggtatgatggtcacgt 60

                                                                       
Query: 363 gttggatccactagcaaatcttcaatttacaactgggacatattacatgcttgcatccag 422
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61  gttggatccactagcaaatcttcaatttacaactgggacatattacatgcttgcatccag 120

                                                                       
Query: 423 tatcaaacaactagcaaaagatttatgtgggggtcgatgtgtgtttttcttggaaggagg 482
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 tatcaaacaactagcaaaagatttatgtgggggtcgatgtgtgtttttcttggaaggagg 180

                                                                       
Query: 483 atacaatctcaagtctctttcatattcagtggccgactcattccgtgctctcatcgggga 542
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 atacaatctcaagtctctttcatattcagtggccgactcattccgtgctctcatcgggga 240

                                                                       
Query: 543 tcaaagcttggcatccgagttcgataaccccaacattttgtatgaagagccaacagctaa 602
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 tcaaagcttggcatccgagttcgataaccccaacattttgtatgaagagccaacagctaa 300

                                                         
Query: 603 gattaagcaagcaattcagaggattaaacacattcattccctgtga 648
           ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 gattaagcaagcaattcagaggattaaacacattcattccctgtga 346