Miyakogusa Predicted Gene
- Lj1g3v1318060.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj1g3v1318060.1 Non Chatacterized Hit- tr|J3LLE2|J3LLE2_ORYBR
Uncharacterized protein OS=Oryza brachyantha
GN=OB03G1,35.46,4e-18,seg,NULL; zinc finger,Zinc finger, CCCH-type; no
description,NULL; CCCH zinc finger,NULL; ZF_C3H1,Zi,CUFF.27195.1
(2412 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC67886 weakly similar to UniRef100_A7NSJ8 Cluster: Chr... 1124 0.0
gnl|LJGI|TC70946 similar to UniRef100_A4R6J6 Cluster: Predicted ... 801 0.0
gnl|LJGI|TC74168 similar to UniRef100_Q9LIH5 Cluster: Genomic DN... 488 e-137
gnl|LJGI|BP065799 226 5e-58
gnl|LJGI|TC82034 weakly similar to UniRef100_Q9LIH5 Cluster: Gen... 206 5e-52
gnl|LJGI|GO038408 weakly similar to UniRef100_Q9LIH5 Cluster: Ge... 92 2e-17
>gnl|LJGI|TC67886 weakly similar to UniRef100_A7NSJ8 Cluster: Chromosome chr18
scaffold_1, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome chr18 scaffold_1, whole genome
shotgun sequence - Vitis vinifera (Grape), partial (16%)
Length = 851
Score = 1124 bits (567), Expect = 0.0
Identities = 579/583 (99%)
Strand = Plus / Plus
Query: 1830 taatccaagtgggttcagcccaatgatttctcctagtaaaattattccaaaagaatcagt 1889
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 taatccaagtgggttcagcccaatgatttctcctagtaaaattattccaaaagaatcagt 60
Query: 1890 agaaatgccatcactgttatctaactctgaacaatttgatgattcttgtaagactgcctt 1949
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 agaaatgccatcactgttatctaactctgaacaatttgatgattcttgtaagactgcctt 120
Query: 1950 ttcagaagaacaacttgtcaagagtaaacatttaattcagttgcagaaagatgaaaacat 2009
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 ttcagaagaacaacttgtcaagagtaaacatttaattcagttgcagaaagatgaaaacat 180
Query: 2010 tggggataataaggagagtaatgaaatggtagctgaagaaaagcgaagttctcgaggtga 2069
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 tggggataataaggagagtaatgaaatggtagctgaagaaaagcgaagttctcgaggtga 240
Query: 2070 gaataaaattacaaaagagagtggtcctttggaaagcatggaccaaagtggtgggcctga 2129
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 gaataaaattacaaaagagagtggtcctttggaaagcatggaccaaagtggtgggcctga 300
Query: 2130 tgagatcaagaaaacaaaggatgtgaaggggatgcgtgcatttaaaggttcattggtgga 2189
|||||||||||| || ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 tgagatcaagaacaccaaggatgtgaaggggatgcgtgcatttaaaggttcattggtgga 360
Query: 2190 gttcattaaggagcttctaaaaccaacatggaaagaaggccaaatcaccaaagacgatta 2249
|||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 361 gttcattaaggagcttctaaaacccacatggaaagaaggccaaatcaccaaagacgatta 420
Query: 2250 taaagaaatagtgaagaaagttactgataaagtatctgttacagtgcagcgggcacatgt 2309
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 taaagaaatagtgaagaaagttactgataaagtatctgttacagtgcagcgggcacatgt 480
Query: 2310 tcctcaaacacaagagaaaattgaccgctatttatcagtttcgaaaccaaagcttaacaa 2369
|||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 481 tcctcaaacacaagagaaaattgaccgctatttatcagtttcgaaacccaagcttaacaa 540
Query: 2370 acttatacaggcatatgtggaaaaggttcagaaggcgtagtgg 2412
|||||||||||||||||||||||||||||||||||||||||||
Sbjct: 541 acttatacaggcatatgtggaaaaggttcagaaggcgtagtgg 583
>gnl|LJGI|TC70946 similar to UniRef100_A4R6J6 Cluster: Predicted protein; n=1;
Magnaporthe grisea|Rep: Predicted protein - Magnaporthe
grisea (Rice blast fungus) (Pyricularia grisea), partial
(3%)
Length = 699
Score = 801 bits (404), Expect = 0.0
Identities = 427/436 (97%), Gaps = 9/436 (2%)
Strand = Plus / Minus
Query: 1 atgaacaaaagtggcaggaagctctcttcaaaatgggatttgatagacgaacgcgaatct 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 436 atgaacaaaagtggcaggaagctctcttcaaaatgggatttgatagacgaacgcgaatct 377
Query: 61 gaatttgcacccgatggtgttgctaacagcaatagtactagttctagatggtcctacaag 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 376 gaatttgcacccgatggtgttgctaacagcaatagtactagttctagatggtcctacaag 317
Query: 121 gaaagaaatgataggttaaaccccagaatggaatttttatccaaggaacctttgtctgga 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 316 gaaagaaatgataggttaaaccccagaatggaatttttatccaaggaacctttgtctgga 257
Query: 181 ggcacacattcaaataaatatgatggtacgaataatgaggaatacagagttttggatgca 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 256 ggcacacattcaaataaatatgatggtacgaataatgaggaatacagagttttggatgca 197
Query: 241 acaattgcaagggacaccgatggaagttacgggatggaaatgtctccagggtttgaagac 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 196 acaattgcaagggacaccgatggaagttacgggatggaaatgtctccagggtttgaagac 137
Query: 301 tggaaaaataagcacagtcaatctccaaaaaatagttacag---------caggagtagt 351
||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 136 tggaaaaataagcacagtcaatctccaaaaaatagttacagcaggttagtcaggagtagt 77
Query: 352 cggagcaggagtcgaagccctccacatggttttaagttggattcaggagtcaatggcaga 411
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 76 cggagcaggagtcgaagccctccacatggttttaagttggattcaggagtcaatggcaga 17
Query: 412 aacagaatgcggcccg 427
||||||||||||||||
Sbjct: 16 aacagaatgcggcccg 1
>gnl|LJGI|TC74168 similar to UniRef100_Q9LIH5 Cluster: Genomic DNA, chromosome 3, TAC
clone:K24M9; n=2; Arabidopsis thaliana|Rep: Genomic DNA,
chromosome 3, TAC clone:K24M9 - Arabidopsis thaliana
(Mouse-ear cress), partial (12%)
Length = 511
Score = 488 bits (246), Expect = e-137
Identities = 253/254 (99%), Gaps = 1/254 (0%)
Strand = Plus / Plus
Query: 2128 gatgagatcaagaaaacaaaggatgtgaaggggatgcgtgcatttaaaggttcattggtg 2187
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 gatgagatcaagaaaacaaaggatgtgaaggggatgcgtgcatttaaaggttcattggtg 60
Query: 2188 gagttcattaaggagcttctaaaaccaacatggaaagaaggccaaatc-accaaagacga 2246
|||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 61 gagttcattaaggagcttctaaaaccaacatggaaagaaggccaaatccaccaaagacga 120
Query: 2247 ttataaagaaatagtgaagaaagttactgataaagtatctgttacagtgcagcgggcaca 2306
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 ttataaagaaatagtgaagaaagttactgataaagtatctgttacagtgcagcgggcaca 180
Query: 2307 tgttcctcaaacacaagagaaaattgaccgctatttatcagtttcgaaaccaaagcttaa 2366
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 tgttcctcaaacacaagagaaaattgaccgctatttatcagtttcgaaaccaaagcttaa 240
Query: 2367 caaacttatacagg 2380
||||||||||||||
Sbjct: 241 caaacttatacagg 254
>gnl|LJGI|BP065799
Length = 467
Score = 226 bits (114), Expect = 5e-58
Identities = 129/134 (96%)
Strand = Plus / Minus
Query: 2247 ttataaagaaatagtgaagaaagttactgataaagtatctgttacagtgcagcgggcaca 2306
||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 467 ttataaagaaatagtgaagaaagttactgataaagtatctgttaccgtgcagcgggcaca 408
Query: 2307 tgttcctcaaacacaagagaaaattgaccgctatttatcagtttcgaaaccaaagcttaa 2366
|||||||| ||||| |||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 407 tgttcctccaacaccagagaaaattgaccgctatttatcagtttcgaaacccaagcttaa 348
Query: 2367 caaacttatacagg 2380
| ||||||||||||
Sbjct: 347 ccaacttatacagg 334
Score = 65.9 bits (33), Expect = 1e-09
Identities = 33/33 (100%)
Strand = Plus / Minus
Query: 2380 gcatatgtggaaaaggttcagaaggcgtagtgg 2412
|||||||||||||||||||||||||||||||||
Sbjct: 158 gcatatgtggaaaaggttcagaaggcgtagtgg 126
>gnl|LJGI|TC82034 weakly similar to UniRef100_Q9LIH5 Cluster: Genomic DNA, chromosome
3, TAC clone:K24M9; n=2; Arabidopsis thaliana|Rep:
Genomic DNA, chromosome 3, TAC clone:K24M9 - Arabidopsis
thaliana (Mouse-ear cress), partial (13%)
Length = 700
Score = 206 bits (104), Expect = 5e-52
Identities = 266/320 (83%)
Strand = Plus / Plus
Query: 2091 tggtcctttggaaagcatggaccaaagtggtgggcctgatgagatcaagaaaacaaagga 2150
|||||||||||| | |||||||||| |||||| ||||||||| |||||||||||||||
Sbjct: 52 tggtcctttggacaacatggaccaacctggtggacctgatgaggccaagaaaacaaagga 111
Query: 2151 tgtgaaggggatgcgtgcatttaaaggttcattggtggagttcattaaggagcttctaaa 2210
|||||||| | | ||||| |||||| |||||||| || || | ||||||||||| ||
Sbjct: 112 tgtgaaggagcttcgtgcctttaaattttcattggccgacttggtcaaggagcttctgaa 171
Query: 2211 accaacatggaaagaaggccaaatcaccaaagacgattataaagaaatagtgaagaaagt 2270
||| ||||||||||||| ||| ||| ||||| |||| |||| ||| |||||||||||
Sbjct: 172 gccagcatggaaagaaggtcaagtcaataaagaagattttaaaacaattgtgaagaaagt 231
Query: 2271 tactgataaagtatctgttacagtgcagcgggcacatgttcctcaaacacaagagaaaat 2330
| ||| |||||||||| ||| ||||| || | || ||||||| ||| ||||||||||
Sbjct: 232 tgttgaaaaagtatctggtactatgcaggggtcccaaattcctcagacaaaagagaaaat 291
Query: 2331 tgaccgctatttatcagtttcgaaaccaaagcttaacaaacttatacaggcatatgtgga 2390
||| | ||||| |||||||| | | ||||||||| ||||||| ||||||||||||||||
Sbjct: 292 tgatcaatatttgtcagtttcaagaacaaagcttaccaaacttgtacaggcatatgtgga 351
Query: 2391 aaaggttcagaaggcgtagt 2410
||||||||||||||| ||||
Sbjct: 352 aaaggttcagaaggcttagt 371
>gnl|LJGI|GO038408 weakly similar to UniRef100_Q9LIH5 Cluster: Genomic DNA, chromosome
3, TAC clone:K24M9; n=2; Arabidopsis thaliana|Rep:
Genomic DNA, chromosome 3, TAC clone:K24M9 - Arabidopsis
thaliana (Mouse-ear cress), partial (5%)
Length = 893
Score = 91.7 bits (46), Expect = 2e-17
Identities = 271/346 (78%)
Strand = Plus / Minus
Query: 437 cacaaccatgtagagattttgctgctgggaaatgcattagaggtagtcaatgtcatttcc 496
|||||||||| |||||||||||| |||| | ||| | |||||||| | || |||| |
Sbjct: 364 cacaaccatgcagagattttgcttctggcacatgtagaagaggtagcctttgcaattttc 305
Query: 497 ttcaccatgataatcaaaattatgagaacggcagggaaagtagacaaaggcaagatagag 556
| || ||||||||||||||| ||| ||| | ||||||||| || || ||||| |||
Sbjct: 304 tccatcatgataatcaaaatcctgaaaacagttgggaaagtaagcacagagaagatggag 245
Query: 557 ctcccgggtattcagctccccatgagagtggggacatttcccttacaagtggaagatctg 616
|||| | ||||| | | |||| |||||| ||||| ||| ||| ||||| ||| ||
Sbjct: 244 ctcctagatattctgatacccacgagagtagggaccattcttttaggagtggtagagcta 185
Query: 617 atgaagcttgtattaactttgcaaaaggaaggtgtagattcggagcatcatgcaggcatg 676
|||||||||||||||| ||||| ||||| ||||||||| ||| ||||||||| | ||
Sbjct: 184 atgaagcttgtattaattttgcgaaaggcaggtgtagacagggatcatcatgcaagtttg 125
Query: 677 tgcatcatggcaattctgatgaattcggcaaagtttctgtgggtgaatcaagtagggaaa 736
|||||||| ||||||||||| | ||| |||||||||| || ||||| || ||| ||||
Sbjct: 124 tgcatcataacaattctgatgggtacggtaaagtttctggggatgaattaactagagaaa 65
Query: 737 atgacattgataacaggcgcttagagaattctttcaagcagggtgg 782
| || ||||||| |||||| ||| | |||||| ||||||||||
Sbjct: 64 aggaaattgatagaaggcgcagagatagttcttttgagcagggtgg 19