Miyakogusa Predicted Gene
- Lj1g3v1316950.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj1g3v1316950.1 tr|G7JBL1|G7JBL1_MEDTR GDP-mannose transporter
OS=Medicago truncatula GN=MTR_3g096310 PE=4 SV=1,87.65,0,Multidrug
resistance efflux transporter EmrE,NULL; SOLUTE CARRIER FAMILY
35,NULL; seg,NULL,CUFF.27112.1
(996 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC81213 similar to UniRef100_A7QB48 Cluster: Chromosome... 1298 0.0
gnl|LJGI|TC60552 similar to UniRef100_A7QB48 Cluster: Chromosome... 745 0.0
>gnl|LJGI|TC81213 similar to UniRef100_A7QB48 Cluster: Chromosome chr4 scaffold_73,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr4 scaffold_73, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (61%)
Length = 1161
Score = 1298 bits (655), Expect = 0.0
Identities = 661/663 (99%)
Strand = Plus / Plus
Query: 334 agtctgaaatacattaatgtagccatggtgacagtcctgaagaatgttactaatgtcata 393
||||||||||||||||||| |||||||| |||||||||||||||||||||||||||||||
Sbjct: 69 agtctgaaatacattaatgcagccatggcgacagtcctgaagaatgttactaatgtcata 128
Query: 394 accgcccttggtgaaatgtacttgtttaagaagcaccacgacagcagagtctgggctgct 453
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 129 accgcccttggtgaaatgtacttgtttaagaagcaccacgacagcagagtctgggctgct 188
Query: 454 ctatttctaatgattatttcggcaattactggagggattactgatctctcctttaatgca 513
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 189 ctatttctaatgattatttcggcaattactggagggattactgatctctcctttaatgca 248
Query: 514 actggctatatttggcagacactaaactgcttcttaactgcatcatattctctgacccta 573
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 249 actggctatatttggcagacactaaactgcttcttaactgcatcatattctctgacccta 308
Query: 574 cgaagagtcatggatacagcaaagcaagttactaagtccggaaatttaaatgagttttcg 633
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 309 cgaagagtcatggatacagcaaagcaagttactaagtccggaaatttaaatgagttttcg 368
Query: 634 atggtcttgttgaacaacatcctttctttgcctttgggaattttcctggttgttgttttc 693
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 369 atggtcttgttgaacaacatcctttctttgcctttgggaattttcctggttgttgttttc 428
Query: 694 aatgaggtggattatctcttcacaacgccacttttgagattgcctagcttttggttggtg 753
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 429 aatgaggtggattatctcttcacaacgccacttttgagattgcctagcttttggttggtg 488
Query: 754 atgaccttcagtggatttttgggactagcaatcagcttcacatccatgtggtttcttcat 813
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 489 atgaccttcagtggatttttgggactagcaatcagcttcacatccatgtggtttcttcat 548
Query: 814 caaacaggggctacaacttacagtctcgtaggttcgctgaacaagataccactttcggtt 873
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 549 caaacaggggctacaacttacagtctcgtaggttcgctgaacaagataccactttcggtt 608
Query: 874 gctggcatccttctgtttaaagttcctactagtttgcagaattctgctagcatattgttt 933
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 609 gctggcatccttctgtttaaagttcctactagtttgcagaattctgctagcatattgttt 668
Query: 934 ggtcttctggcaggggtgtttttcgctagagcgaaaatccgggagagatctcaatcttga 993
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 669 ggtcttctggcaggggtgtttttcgctagagcgaaaatccgggagagatctcaatcttga 728
Query: 994 aga 996
|||
Sbjct: 729 aga 731
>gnl|LJGI|TC60552 similar to UniRef100_A7QB48 Cluster: Chromosome chr4 scaffold_73,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr4 scaffold_73, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (28%)
Length = 792
Score = 745 bits (376), Expect = 0.0
Identities = 386/388 (99%), Gaps = 1/388 (0%)
Strand = Plus / Plus
Query: 1 atgaagccttctataaatgaagaacatgatgtggaagatggcaagttggtcaaaagcaaa 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 406 atgaagccttctataaatgaagaacatgatgtggaagatggcaagttggtcaaaagcaaa 465
Query: 61 acaaataaaattcccaatcaagccttgttggctggacttgcatattgtctttcctcttgt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 466 acaaataaaattcccaatcaagccttgttggctggacttgcatattgtctttcctcttgt 525
Query: 121 agcatgattttggttaacaagtttgtactttccagctatgattttaatgctgggatatcc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 526 agcatgattttggttaacaagtttgtactttccagctatgattttaatgctgggatatcc 585
Query: 181 ttgatggtgtaccagaatttcatttcagtgattcttgttactattttgagtcttctgggt 240
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 586 ttgatggtgtaccagaacttcatttcagtgattcttgttactattttgagtcttctgggt 645
Query: 241 ttagtttcaactgagccactaacatggagattgattaaagtttggtttcctgtgaatgtt 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 646 ttagtttcaactgagccactaacatggagattgattaaagtttggtttcctgtgaatgtt 705
Query: 301 atatttgtgggaatgctcattacaagcatgtttagtctgaaatacattaatgtagccatg 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 706 atatttgtgggaatgctcattacaagcatgtttagtctgaaatacattaatgtagccatg 765
Query: 361 gtgacagtcctgaagaatgttactaatg 388
|||||||||||| |||||||||||||||
Sbjct: 766 gtgacagtcctg-agaatgttactaatg 792