Miyakogusa Predicted Gene

Lj1g3v1316860.1
Show Alignment: 

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj1g3v1316860.1 tr|G7JBJ9|G7JBJ9_MEDTR Callose synthase
OS=Medicago truncatula GN=MTR_3g096200 PE=4 SV=1,87.39,0,seg,NULL;
Glucan_synthase,Glycosyl transferase, family 48;
AA_TRANSFER_CLASS_1,Aminotransferases, cl,CUFF.27104.1
         (3267 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|BP033918                                                     575   e-163
gnl|LJGI|BP057687 similar to UniRef100_A7P002 Cluster: Chromosom...    76   2e-12
gnl|LJGI|BP052274 homologue to UniRef100_A2Q2S3 Cluster: Glycosy...    76   2e-12

>gnl|LJGI|BP033918 
          Length = 512

 Score =  575 bits (290), Expect = e-163
 Identities = 290/290 (100%)
 Strand = Plus / Minus

                                                                        
Query: 2978 tgggagatatctttgtgagcctcttagcttttttgcctacagcatgggcacttattcaga 3037
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 512  tgggagatatctttgtgagcctcttagcttttttgcctacagcatgggcacttattcaga 453

                                                                        
Query: 3038 tagcacaagcatgcagaccattggtgaagggtgttggaatgtggggttcagtgaaagctt 3097
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 452  tagcacaagcatgcagaccattggtgaagggtgttggaatgtggggttcagtgaaagctt 393

                                                                        
Query: 3098 tagcaaggggctatgaatacctgatgggagtggttatttttacaccagtggccatattgg 3157
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 392  tagcaaggggctatgaatacctgatgggagtggttatttttacaccagtggccatattgg 333

                                                                        
Query: 3158 catggttcccatttgtttcagaattccaaacgaggctgctattcaaccaagcattcagcc 3217
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 332  catggttcccatttgtttcagaattccaaacgaggctgctattcaaccaagcattcagcc 273

                                                              
Query: 3218 gagggcttcaaatccagcgcattttgtctggtggcaagaagaataagtaa 3267
            ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 272  gagggcttcaaatccagcgcattttgtctggtggcaagaagaataagtaa 223


>gnl|LJGI|BP057687 similar to UniRef100_A7P002 Cluster: Chromosome chr6 scaffold_3,
            whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
            Chromosome chr6 scaffold_3, whole genome shotgun sequence
            - Vitis vinifera (Grape), partial (29%)
          Length = 573

 Score = 75.8 bits (38), Expect = 2e-12
 Identities = 56/62 (90%)
 Strand = Plus / Minus

                                                                        
Query: 3154 ttggcatggttcccatttgtttcagaattccaaacgaggctgctattcaaccaagcattc 3213
            ||||||||||||||||||||||||||||| ||||| ||  |||| ||||||||||| |||
Sbjct: 356  ttggcatggttcccatttgtttcagaatttcaaacaagaatgcttttcaaccaagctttc 297

              
Query: 3214 ag 3215
            ||
Sbjct: 296  ag 295


>gnl|LJGI|BP052274 homologue to UniRef100_A2Q2S3 Cluster: Glycosyl transferase, family
            48; n=1; Medicago truncatula|Rep: Glycosyl transferase,
            family 48 - Medicago truncatula (Barrel medic), partial
            (15%)
          Length = 563

 Score = 75.8 bits (38), Expect = 2e-12
 Identities = 105/126 (83%), Gaps = 1/126 (0%)
 Strand = Plus / Plus

                                                                        
Query: 1573 agtgtttcttc-cttggcttggtttatgtcaaatcaagaaacaagctttgtcacaattgg 1631
            ||||||||||| || ||| ||||| ||||||||||| || ||||| || || ||||||||
Sbjct: 65   agtgtttcttcgctgggcatggttcatgtcaaatcaggagacaagtttcgtgacaattgg 124

                                                                        
Query: 1632 tcaaagagttcttgcaagacccctgaaggtccgattccactatggtcatccagatgtttt 1691
            ||||||| |  | || |  ||||||||||| || ||||||||||||||||| ||||| ||
Sbjct: 125  tcaaagattgttggctaatcccctgaaggttcgtttccactatggtcatcccgatgtctt 184

                  
Query: 1692 tgatag 1697
             |||||
Sbjct: 185  cgatag 190



 Score = 69.9 bits (35), Expect = 1e-10
 Identities = 110/135 (81%)
 Strand = Plus / Plus

                                                                        
Query: 1744 atcaatctgagcgaggatatttttgccggattcaactcaacactacgtcgtgggaatatt 1803
            |||||||| || || ||||||||||| || |||||||| ||||| ||    || ||| ||
Sbjct: 237  atcaatctaagtgaagatatttttgctggcttcaactctacactccgggaaggaaatgtt 296

                                                                        
Query: 1804 acccatcatgaatacatccaagttggaaagggcagagatgttgggctcaatcaaatctca 1863
            ||||||||||| ||||| || ||||| ||||| |||||||| || ||||| ||||| || 
Sbjct: 297  acccatcatgagtacatacaggttgggaagggaagagatgtgggtctcaaccaaatttct 356

                           
Query: 1864 ctttttgaagcaaag 1878
             | ||||||||||||
Sbjct: 357  atgtttgaagcaaag 371