Miyakogusa Predicted Gene
- Lj1g3v1300630.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj1g3v1300630.1 tr|D8LY48|D8LY48_BLAHO Singapore isolate B
(sub-type 7) whole genome shotgun sequence assembly,
scaf,35.67,1e-18,seg,NULL; SET domain,NULL; no
description,NULL,CUFF.27094.1
(678 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|AU251713 similar to UniRef100_A7QB84 Cluster: Chromosom... 406 e-113
gnl|LJGI|TC71442 similar to UniRef100_A7QB84 Cluster: Chromosome... 119 2e-26
gnl|LJGI|AV775734 similar to UniRef100_A7QB84 Cluster: Chromosom... 105 4e-22
>gnl|LJGI|AU251713 similar to UniRef100_A7QB84 Cluster: Chromosome chr4 scaffold_73,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr4 scaffold_73, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (20%)
Length = 423
Score = 406 bits (205), Expect = e-113
Identities = 223/229 (97%)
Strand = Plus / Plus
Query: 81 agatgctaggaggcgtcggagaactcgacctcgggtagtccagaagaaaaagaggagact 140
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 185 agatgctaggaggcgtcggagaactcgacctcgggtagtccagaagaaaaagaggagact 244
Query: 141 gttaccatttattccttcagaagatcctgcccagagactgaaacaaatgggttcccttgc 200
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 245 gttaccatttattccttcagaagatcctgcccagagactgaaacaaatgggttcccttgc 304
Query: 201 ttctgctttaacagcaatgcatatggattacagtgatcacctcacatacatgcctggaat 260
|||||||||||||||| |||||||||| |||| |||||| ||||||||||||||||||||
Sbjct: 305 ttctgctttaacagcattgcatatggaatacaatgatcatctcacatacatgcctggaat 364
Query: 261 ggctcctggatctgctaatgacaccgattttgaacgtggtggcatgcag 309
||||| |||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 365 ggctcatggatctgctaatgacgccgattttgaacgtggtggcatgcag 413
>gnl|LJGI|TC71442 similar to UniRef100_A7QB84 Cluster: Chromosome chr4 scaffold_73,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr4 scaffold_73, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (21%)
Length = 546
Score = 119 bits (60), Expect = 2e-26
Identities = 99/112 (88%)
Strand = Plus / Plus
Query: 556 cttgttatatgtgctgataaacgcggaaacctcgctcgctttatcagtggcatcaacaat 615
|||||||| |||||||||||||| |||||| | |||||||||||| ||||||| |||||
Sbjct: 18 cttgttatctgtgctgataaacgtggaaacatttctcgctttatcaatggcatccacaat 77
Query: 616 cataccctggaaggaaggaagaagcagaactgtaaatgtgtaagatacaatg 667
||||| | |||||| | ||||||||||||||| |||| ||||||||||||||
Sbjct: 78 catactcaggaaggtaagaagaagcagaactgcaaatctgtaagatacaatg 129
>gnl|LJGI|AV775734 similar to UniRef100_A7QB84 Cluster: Chromosome chr4 scaffold_73,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr4 scaffold_73, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (14%)
Length = 427
Score = 105 bits (53), Expect = 4e-22
Identities = 53/53 (100%)
Strand = Plus / Minus
Query: 615 tcataccctggaaggaaggaagaagcagaactgtaaatgtgtaagatacaatg 667
|||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 427 tcataccctggaaggaaggaagaagcagaactgtaaatgtgtaagatacaatg 375