Miyakogusa Predicted Gene
- Lj1g3v1300580.4
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj1g3v1300580.4 tr|G7JBH4|G7JBH4_MEDTR Secondary cell
wall-related glycosyltransferase family OS=Medicago
truncatula,87.76,0,Glyco_transf_8,Glycosyl transferase, family 8;
GALACTINOL SYNTHASE-RELATED,NULL; GLYCOGENIN,NULL; no,CUFF.27120.4
(1914 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC66396 similar to UniRef100_A7QB81 Cluster: Chromosome... 1544 0.0
gnl|LJGI|AV777580 similar to UniRef100_Q5BMA3 Cluster: Secondary... 940 0.0
gnl|LJGI|TC81875 similar to UniRef100_Q5BMA3 Cluster: Secondary ... 797 0.0
>gnl|LJGI|TC66396 similar to UniRef100_A7QB81 Cluster: Chromosome chr4 scaffold_73,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr4 scaffold_73, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (40%)
Length = 930
Score = 1544 bits (779), Expect = 0.0
Identities = 782/783 (99%)
Strand = Plus / Plus
Query: 1132 gaatggaactacagcaaattccggttatggcagctgacagattatgacaagataatattc 1191
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2 gaatggaactacagcaaattccggttatggcagctgacagattatgacaagataatattc 61
Query: 1192 attgatgcagatttgctcatactaagaaacatagactttctcttcggaatgccagaaatc 1251
|||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 62 attgatgcagatttgctcatactaagaaacatagactttctcctcggaatgccagaaatc 121
Query: 1252 actgctactggtaatgatgctactctttttaactcgggtgtcatgttgatagagccatca 1311
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 122 actgctactggtaatgatgctactctttttaactcgggtgtcatgttgatagagccatca 181
Query: 1312 aattgcacattccagctcctgatggatcatattaatgagattgagtcctacaatggaggg 1371
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 182 aattgcacattccagctcctgatggatcatattaatgagattgagtcctacaatggaggg 241
Query: 1372 gaccagggatacctgaatgaaatatttacatggtggcacaggataccaagacacatgaac 1431
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 242 gaccagggatacctgaatgaaatatttacatggtggcacaggataccaagacacatgaac 301
Query: 1432 ttcttgaagcatttctggattggtgacgaggaagagaagaagcaaatgaaaaccaggctg 1491
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 302 ttcttgaagcatttctggattggtgacgaggaagagaagaagcaaatgaaaaccaggctg 361
Query: 1492 tttggtgccgagcctccagttctttatgtccttcactatcttggtatgaagccatggtta 1551
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 362 tttggtgccgagcctccagttctttatgtccttcactatcttggtatgaagccatggtta 421
Query: 1552 tgcttccgggactacgattgtaactggaatgctgacatatttcatgagtttgcaagtgat 1611
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 422 tgcttccgggactacgattgtaactggaatgctgacatatttcatgagtttgcaagtgat 481
Query: 1612 gttgcacatgcaaagtggtggaaggtgcacgatacaatgcctgagcttttgcagcagttc 1671
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 482 gttgcacatgcaaagtggtggaaggtgcacgatacaatgcctgagcttttgcagcagttc 541
Query: 1672 tgcctattgaagtcaaagcagaaggcacagttggagtgggatcgccggcaggctgaaata 1731
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 542 tgcctattgaagtcaaagcagaaggcacagttggagtgggatcgccggcaggctgaaata 601
Query: 1732 gcaaactacacagatgggcattggcgaatcaaagttaaggatcgccgcttgaagaaatgc 1791
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 602 gcaaactacacagatgggcattggcgaatcaaagttaaggatcgccgcttgaagaaatgc 661
Query: 1792 atagataatttatgcaactggaaaagcatgttgcggcactggggagagacgaattggaca 1851
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 662 atagataatttatgcaactggaaaagcatgttgcggcactggggagagacgaattggaca 721
Query: 1852 gatgatgagtcttttactccatcaccacccgccatcaccacatcgtctctacctgcttta 1911
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 722 gatgatgagtcttttactccatcaccacccgccatcaccacatcgtctctacctgcttta 781
Query: 1912 tga 1914
|||
Sbjct: 782 tga 784
>gnl|LJGI|AV777580 similar to UniRef100_Q5BMA3 Cluster: Secondary cell wall-related
glycosyltransferase family 8; n=1; Populus tremula x
Populus tremuloides|Rep: Secondary cell wall-related
glycosyltransferase family 8 - Populus tremula x Populus
tremuloides, partial (13%)
Length = 494
Score = 940 bits (474), Expect = 0.0
Identities = 474/474 (100%)
Strand = Plus / Plus
Query: 1 atgagaggaacaatgggaacttctcctcgtgcagtggaagctcgacaccgtttgcctgca 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 21 atgagaggaacaatgggaacttctcctcgtgcagtggaagctcgacaccgtttgcctgca 80
Query: 61 tccattgaagatttatacaaacgaagacagccaagaagtaaattgaaagatgtagagaaa 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 81 tccattgaagatttatacaaacgaagacagccaagaagtaaattgaaagatgtagagaaa 140
Query: 121 cctttccacttacccatccaagataggaactcaaaatgcaagtttcctttcttgaaactt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 141 cctttccacttacccatccaagataggaactcaaaatgcaagtttcctttcttgaaactt 200
Query: 181 atccttttgataaccatttgcggcacttttgtaatacttctttactctccagaggtttac 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 atccttttgataaccatttgcggcacttttgtaatacttctttactctccagaggtttac 260
Query: 241 aataccaaccatttatcaacctctggctctaggtggatatggggaggcttagaccctcgg 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 aataccaaccatttatcaacctctggctctaggtggatatggggaggcttagaccctcgg 320
Query: 301 tacatgactaatgtggatactaactgggatgatatagtgaaagtcacacagaacctgata 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 tacatgactaatgtggatactaactgggatgatatagtgaaagtcacacagaacctgata 380
Query: 361 gggaaaaatgaatttcaagggattggactactaaacttcaataacactgaaattgtccat 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 gggaaaaatgaatttcaagggattggactactaaacttcaataacactgaaattgtccat 440
Query: 421 tgggagcatcattttcctgatgccacacatgttgatctgcctctggagcatgct 474
||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 tgggagcatcattttcctgatgccacacatgttgatctgcctctggagcatgct 494
>gnl|LJGI|TC81875 similar to UniRef100_Q5BMA3 Cluster: Secondary cell wall-related
glycosyltransferase family 8; n=1; Populus tremula x
Populus tremuloides|Rep: Secondary cell wall-related
glycosyltransferase family 8 - Populus tremula x Populus
tremuloides, partial (21%)
Length = 1201
Score = 797 bits (402), Expect = 0.0
Identities = 419/422 (99%), Gaps = 2/422 (0%)
Strand = Plus / Plus
Query: 1493 ttggtgccgagcctccagttctttatgtccttcactatcttggtatgaagccatggttat 1552
|||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5 ttggtgccgagc-tccagttctttatgtccttcactatcttggtatgaagccatggttat 63
Query: 1553 gcttccgggactacgattgtaactggaatgctgacatatttcatgagtttgcaagtgatg 1612
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 64 gcttccgggactacgattgtaactggaatgctgacatatttcatgagtttgcaagtgatg 123
Query: 1613 ttgcacatgcaaagtggtggaaggtgcacgatacaatgcctgagcttttgcagcagttct 1672
||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 124 ttgcacatgcaaagtggtggaaggtgcacgatacaatgc-tgagcttttgcagcagttct 182
Query: 1673 gcctattgaagtcaaagcagaaggcacagttggagtgggatcgccggcaggctgaaatag 1732
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 183 gcctattgaagtcaaagcagaaggcacagttggagtgggatcgccggcaggctgaaatag 242
Query: 1733 caaactacacagatgggcattggcgaatcaaagttaaggatcgccgcttgaagaaatgca 1792
||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 243 caaactacatagatgggcattggcgaatcaaagttaaggatcgccgcttgaagaaatgca 302
Query: 1793 tagataatttatgcaactggaaaagcatgttgcggcactggggagagacgaattggacag 1852
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 303 tagataatttatgcaactggaaaagcatgttgcggcactggggagagacgaattggacag 362
Query: 1853 atgatgagtcttttactccatcaccacccgccatcaccacatcgtctctacctgctttat 1912
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 363 atgatgagtcttttactccatcaccacccgccatcaccacatcgtctctacctgctttat 422
Query: 1913 ga 1914
||
Sbjct: 423 ga 424