Miyakogusa Predicted Gene
- Lj1g3v1287010.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj1g3v1287010.1 Non Chatacterized Hit- tr|B9WL93|B9WL93_CANDC
Autophagy-related protein, putative OS=Candida
dublini,28.41,4e-16,seg,NULL; ATG13,Autophagy-related protein
13,CUFF.27069.1
(1875 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|BP080241 similar to UniRef100_Q9LSA0 Cluster: Emb|CAB62... 620 e-177
gnl|LJGI|FS349171 similar to UniRef100_Q1NRY9 Cluster: Chemotaxi... 60 5e-08
gnl|LJGI|FS322586 similar to UniRef100_Q53PN1 Cluster: Expressed... 60 5e-08
>gnl|LJGI|BP080241 similar to UniRef100_Q9LSA0 Cluster: Emb|CAB62463.1; n=2; Arabidopsis
thaliana|Rep: Emb|CAB62463.1 - Arabidopsis thaliana
(Mouse-ear cress), partial (7%)
Length = 442
Score = 620 bits (313), Expect = e-177
Identities = 313/313 (100%)
Strand = Plus / Minus
Query: 1563 tgaagctggaaaattccttcctatcagaaagtcccaagatgctgcagttggtgcacttgt 1622
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 442 tgaagctggaaaattccttcctatcagaaagtcccaagatgctgcagttggtgcacttgt 383
Query: 1623 acatatgttgaagaaagcggcacctctgcatcaagacttctcgacatctgaacacttgtc 1682
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 382 acatatgttgaagaaagcggcacctctgcatcaagacttctcgacatctgaacacttgtc 323
Query: 1683 accgggcacacgtcccgaaaccttgagcaataacagcattcaagagcccaatcaggttgt 1742
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 322 accgggcacacgtcccgaaaccttgagcaataacagcattcaagagcccaatcaggttgt 263
Query: 1743 agatgggctaaatcaagcgagcatcatgtcgacaatgaataggaaaacaacagctgatgc 1802
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 262 agatgggctaaatcaagcgagcatcatgtcgacaatgaataggaaaacaacagctgatgc 203
Query: 1803 attggaagagttctacagttacagagagatgaaaaacttgttacttatgcgcggcagtaa 1862
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 202 attggaagagttctacagttacagagagatgaaaaacttgttacttatgcgcggcagtaa 143
Query: 1863 gcaacagatatag 1875
|||||||||||||
Sbjct: 142 gcaacagatatag 130
>gnl|LJGI|FS349171 similar to UniRef100_Q1NRY9 Cluster: Chemotaxis sensory transducer;
n=1; delta proteobacterium MLMS-1|Rep: Chemotaxis sensory
transducer - delta proteobacterium MLMS-1, partial (5%)
Length = 585
Score = 60.0 bits (30), Expect = 5e-08
Identities = 57/66 (86%)
Strand = Plus / Minus
Query: 1782 taggaaaacaacagctgatgcattggaagagttctacagttacagagagatgaaaaactt 1841
|||||||||| || ||||||||||||||||||| | |||||| | | |||||||||||
Sbjct: 393 taggaaaacagcaagtgatgcattggaagagttccatggttacaaaaaaatgaaaaactt 334
Query: 1842 gttact 1847
||||||
Sbjct: 333 gttact 328
>gnl|LJGI|FS322586 similar to UniRef100_Q53PN1 Cluster: Expressed protein; n=1; Oryza
sativa Japonica Group|Rep: Expressed protein - Oryza
sativa subsp. japonica (Rice), partial (14%)
Length = 679
Score = 60.0 bits (30), Expect = 5e-08
Identities = 69/82 (84%)
Strand = Plus / Plus
Query: 11 cacactctgaagcggcgaagctggaacaaatcatcaccgagttcttcgccaaaagccttc 70
|||||||||| ||||||||| |||||| || ||||| |||||||| || || || ||||
Sbjct: 188 cacactctgatgcggcgaagacggaacagataatcactgagttctttgcgaagagtcttc 247
Query: 71 acataatcctcgaatcaagggc 92
||||||| || ||||| |||||
Sbjct: 248 acataatacttgaatctagggc 269