Miyakogusa Predicted Gene
- Lj1g3v1276990.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj1g3v1276990.1 tr|A4RYB0|A4RYB0_OSTLU PsaN, PSI-N, photosystem I
polypeptide OS=Ostreococcus lucimarinus (strain
CC,43.48,3e-17,PsaN,Photosystem I PsaN, reaction centre subunit N;
seg,NULL,CUFF.27078.1
(504 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC68671 similar to UniRef100_A7QB42 Cluster: Chromosome... 999 0.0
gnl|LJGI|BW596775 homologue to UniRef100_A7QB42 Cluster: Chromos... 541 e-153
gnl|LJGI|AV427383 similar to UniRef100_Q2JZ80 Cluster: Probable ... 88 6e-17
>gnl|LJGI|TC68671 similar to UniRef100_A7QB42 Cluster: Chromosome chr4 scaffold_73,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr4 scaffold_73, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (82%)
Length = 761
Score = 999 bits (504), Expect = 0.0
Identities = 504/504 (100%)
Strand = Plus / Plus
Query: 1 atggctgccatgaactctagcgtgttggcttgtggctatgccatatctggtgcaggatgt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 135 atggctgccatgaactctagcgtgttggcttgtggctatgccatatctggtgcaggatgt 194
Query: 61 tctgagctcaattcaaagctcacctccatgccctctttgactgtctctggctccaagttg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 195 tctgagctcaattcaaagctcacctccatgccctctttgactgtctctggctccaagttg 254
Query: 121 cccgtgatcaaggcccgccaggcccgagttcctgagcccaaagcatgtgatggaaggaga 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 255 cccgtgatcaaggcccgccaggcccgagttcctgagcccaaagcatgtgatggaaggaga 314
Query: 181 actgcccttgctctcttggcagccacccttttcagcactgcagtctccaattcctctgcc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 315 actgcccttgctctcttggcagccacccttttcagcactgcagtctccaattcctctgcc 374
Query: 241 aatgctggtgtcattgaagaataccttgagaagagcaaggccaacaaggaattgaatgac 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 375 aatgctggtgtcattgaagaataccttgagaagagcaaggccaacaaggaattgaatgac 434
Query: 301 aagaaaaggttagctactagtggggcaaactttgctagagcatacacagttcaatttgga 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 435 aagaaaaggttagctactagtggggcaaactttgctagagcatacacagttcaatttgga 494
Query: 361 acttgcaagttccctgagaacttcactggttgccaagatcttgccaaacaaaagaaagtg 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 495 acttgcaagttccctgagaacttcactggttgccaagatcttgccaaacaaaagaaagtg 554
Query: 421 ccattcatatctgaggatttggagcttgaatgtgaaggaaaggacaagtacaagtgtggt 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 555 ccattcatatctgaggatttggagcttgaatgtgaaggaaaggacaagtacaagtgtggt 614
Query: 481 tcaaatgttttctggaaatggtga 504
||||||||||||||||||||||||
Sbjct: 615 tcaaatgttttctggaaatggtga 638
>gnl|LJGI|BW596775 homologue to UniRef100_A7QB42 Cluster: Chromosome chr4 scaffold_73,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr4 scaffold_73, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (52%)
Length = 407
Score = 541 bits (273), Expect = e-153
Identities = 273/273 (100%)
Strand = Plus / Plus
Query: 232 tcctctgccaatgctggtgtcattgaagaataccttgagaagagcaaggccaacaaggaa 291
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 41 tcctctgccaatgctggtgtcattgaagaataccttgagaagagcaaggccaacaaggaa 100
Query: 292 ttgaatgacaagaaaaggttagctactagtggggcaaactttgctagagcatacacagtt 351
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 101 ttgaatgacaagaaaaggttagctactagtggggcaaactttgctagagcatacacagtt 160
Query: 352 caatttggaacttgcaagttccctgagaacttcactggttgccaagatcttgccaaacaa 411
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 161 caatttggaacttgcaagttccctgagaacttcactggttgccaagatcttgccaaacaa 220
Query: 412 aagaaagtgccattcatatctgaggatttggagcttgaatgtgaaggaaaggacaagtac 471
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 221 aagaaagtgccattcatatctgaggatttggagcttgaatgtgaaggaaaggacaagtac 280
Query: 472 aagtgtggttcaaatgttttctggaaatggtga 504
|||||||||||||||||||||||||||||||||
Sbjct: 281 aagtgtggttcaaatgttttctggaaatggtga 313
>gnl|LJGI|AV427383 similar to UniRef100_Q2JZ80 Cluster: Probable D-ribose ABC
transporter, permease protein; n=1; Rhizobium etli CFN
42|Rep: Probable D-ribose ABC transporter, permease
protein - Rhizobium etli (strain CFN 42 / ATCC 51251),
partial (5%)
Length = 244
Score = 87.7 bits (44), Expect = 6e-17
Identities = 44/44 (100%)
Strand = Plus / Plus
Query: 1 atggctgccatgaactctagcgtgttggcttgtggctatgccat 44
||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 atggctgccatgaactctagcgtgttggcttgtggctatgccat 244