Miyakogusa Predicted Gene
- Lj1g3v1265910.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj1g3v1265910.1 tr|B9GTJ3|B9GTJ3_POPTR Predicted protein
OS=Populus trichocarpa GN=POPTRDRAFT_551322 PE=4
SV=1,41.18,2e-18,seg,NULL; MYB_LIKE,Myb-like domain;
Myb_DNA-bind_4,NULL; FAMILY NOT NAMED,NULL;
Homeodomain-like,Hom,CUFF.27052.1
(1524 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|DC596187 similar to UniRef100_A7QBC3 Cluster: Chromosom... 1082 0.0
gnl|LJGI|DC598807 similar to UniRef100_Q8W239 Cluster: GT-2 fact... 831 0.0
gnl|LJGI|TC71883 similar to UniRef100_A7Q7B9 Cluster: Chromosome... 84 3e-15
gnl|LJGI|TC79341 homologue to UniRef100_A7Q5Y3 Cluster: Chromoso... 74 3e-12
>gnl|LJGI|DC596187 similar to UniRef100_A7QBC3 Cluster: Chromosome chr4 scaffold_73,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr4 scaffold_73, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (19%)
Length = 546
Score = 1082 bits (546), Expect = 0.0
Identities = 546/546 (100%)
Strand = Plus / Plus
Query: 889 gagaaattttatgttattcctgatgaaaatgctaatgggaatgtgaatggagagggagag 948
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 gagaaattttatgttattcctgatgaaaatgctaatgggaatgtgaatggagagggagag 60
Query: 949 aagcagcatcaagagggtggaaatgctaatgttggtgttaatgttgggagtttcatacac 1008
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 aagcagcatcaagagggtggaaatgctaatgttggtgttaatgttgggagtttcatacac 120
Query: 1009 atgagctcatcaagatggcccaaagaagaagtggaggctttgatacggttgaggacacag 1068
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 atgagctcatcaagatggcccaaagaagaagtggaggctttgatacggttgaggacacag 180
Query: 1069 cttgatgtgcagtcacaagggaataataatggatccaattccaagggacctctttgggag 1128
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 cttgatgtgcagtcacaagggaataataatggatccaattccaagggacctctttgggag 240
Query: 1129 gagatttcttcagctatgaagagcattggctatgatcgcagtgccaagaggtgcaaggag 1188
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 gagatttcttcagctatgaagagcattggctatgatcgcagtgccaagaggtgcaaggag 300
Query: 1189 aaatgggagaacataaacaagtacttcaagaggatgaaggagaagaacaagaggaagcct 1248
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 aaatgggagaacataaacaagtacttcaagaggatgaaggagaagaacaagaggaagcct 360
Query: 1249 acggattccaaaacttgtccttattatcaccatcttgaagctttgtacagcaaaaagcct 1308
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 acggattccaaaacttgtccttattatcaccatcttgaagctttgtacagcaaaaagcct 420
Query: 1309 aagaaggtggacgattcaggtagttcaggtaatgagttgaagcccgaggagcttttgatg 1368
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 aagaaggtggacgattcaggtagttcaggtaatgagttgaagcccgaggagcttttgatg 480
Query: 1369 cacattatggggagtcatggagagaggcaacagttagagtcttcatccgaagatggtgat 1428
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 481 cacattatggggagtcatggagagaggcaacagttagagtcttcatccgaagatggtgat 540
Query: 1429 agagag 1434
||||||
Sbjct: 541 agagag 546
>gnl|LJGI|DC598807 similar to UniRef100_Q8W239 Cluster: GT-2 factor; n=1; Glycine
max|Rep: GT-2 factor - Glycine max (Soybean), partial
(38%)
Length = 570
Score = 831 bits (419), Expect = 0.0
Identities = 454/469 (96%), Gaps = 15/469 (3%)
Strand = Plus / Plus
Query: 1 atgctgggaatctcatctttaccggaaactcccatccagaccccgccgccgcacctcgtg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 102 atgctgggaatctcatctttaccggaaactcccatccagaccccgccgccgcacctcgtg 161
Query: 61 caggaggttgctgc---------------cgccgccactgatggaggaccactctccgat 105
|||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 162 caggaggttgctgctgcttccgccgtcgccgccgccactgatggaggaccactctccgat 221
Query: 106 gggttcaaaacggagcacggcgaggatggagaccgcagttccggcgccaaccggtggcct 165
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 222 gggttcaaaacggagcacggcgaggatggagaccgcagttccggcgccaaccggtggcct 281
Query: 166 cgggaggagacaatggctctgctcaggataaggtctgaaatggacgttgccttcagagat 225
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 282 cgggaggagacaatggctctgctcaggataaggtctgaaatggacgttgccttcagagat 341
Query: 226 acaagccctaaagcccctctttgggaacaagtctcaaggaaattagctgagctagggtat 285
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 342 acaagccctaaagcccctctttgggaacaagtctcaaggaaattagctgagctagggtat 401
Query: 286 cataggagtgctaagaagtgcagggaaaaatttgagaacatctacaagtaccataggagg 345
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 402 cataggagtgctaagaagtgcagggaaaaatttgagaacatctacaagtaccataggagg 461
Query: 346 actaaagaaggccgttttggccgagccaacaacagcggcaagacctatcgatttttcgag 405
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 462 actaaagaaggccgttttggccgagccaacaacagcggcaagacctatcgatttttcgag 521
Query: 406 caattggaagctttagagggcaacctggttcatcctccttcttcctctg 454
|||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 522 caattggaagctttagagggcaacctggttcatcctccttcttcctctg 570
>gnl|LJGI|TC71883 similar to UniRef100_A7Q7B9 Cluster: Chromosome chr18 scaffold_59,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr18 scaffold_59, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (19%)
Length = 1291
Score = 83.8 bits (42), Expect = 3e-15
Identities = 48/50 (96%)
Strand = Plus / Plus
Query: 1170 tgccaagaggtgcaaggagaaatgggagaacataaacaagtacttcaaga 1219
||||||||||||||||||||| ||||||||||| ||||||||||||||||
Sbjct: 196 tgccaagaggtgcaaggagaagtgggagaacatcaacaagtacttcaaga 245
>gnl|LJGI|TC79341 homologue to UniRef100_A7Q5Y3 Cluster: Chromosome chr14 scaffold_54,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr14 scaffold_54, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (14%)
Length = 768
Score = 73.8 bits (37), Expect = 3e-12
Identities = 46/49 (93%)
Strand = Plus / Plus
Query: 1168 agtgccaagaggtgcaaggagaaatgggagaacataaacaagtacttca 1216
||||| |||||||| || |||||||||||||||||||||||||||||||
Sbjct: 189 agtgcaaagaggtgtaaagagaaatgggagaacataaacaagtacttca 237