Miyakogusa Predicted Gene
- Lj1g3v1233770.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj1g3v1233770.1 CUFF.27039.1
(372 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC67816 similar to UniRef100_A7PKW8 Cluster: Chromosome... 729 0.0
gnl|LJGI|DC595694 similar to UniRef100_A7PKW8 Cluster: Chromosom... 379 e-105
gnl|LJGI|BW612687 similar to UniRef100_A7PKW8 Cluster: Chromosom... 96 2e-19
gnl|LJGI|TC74094 similar to UniRef100_A7Q792 Cluster: Chromosome... 96 2e-19
>gnl|LJGI|TC67816 similar to UniRef100_A7PKW8 Cluster: Chromosome chr7 scaffold_20,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr7 scaffold_20, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (71%)
Length = 1270
Score = 729 bits (368), Expect = 0.0
Identities = 368/368 (100%)
Strand = Plus / Plus
Query: 1 atggataggtatcagagggtggagaagcccaaggcagatagtcctatcaacgagaacgag 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 185 atggataggtatcagagggtggagaagcccaaggcagatagtcctatcaacgagaacgag 244
Query: 61 atacgcattaccagtcaaggaaggatgaggaattacatcacctacgccaccactctcctt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 245 atacgcattaccagtcaaggaaggatgaggaattacatcacctacgccaccactctcctt 304
Query: 121 caggagaagggatctgatgaaattgttctcaaagcaatgggacgtgcaataaataagact 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 305 caggagaagggatctgatgaaattgttctcaaagcaatgggacgtgcaataaataagact 364
Query: 181 gtaatgattactgagctgatcaagagaaggattgttggtctgcaccagaacactctgatt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 365 gtaatgattactgagctgatcaagagaaggattgttggtctgcaccagaacactctgatt 424
Query: 241 ggatcaactgatataactgacacatgggaaccactagaagaaggccttcttcctttggag 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 425 ggatcaactgatataactgacacatgggaaccactagaagaaggccttcttcctttggag 484
Query: 301 actactcgccatgtttctatgatcacaattaacttgtcaaagaaagaactggatacatcc 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 485 actactcgccatgtttctatgatcacaattaacttgtcaaagaaagaactggatacatcc 544
Query: 361 tccacagg 368
||||||||
Sbjct: 545 tccacagg 552
>gnl|LJGI|DC595694 similar to UniRef100_A7PKW8 Cluster: Chromosome chr7 scaffold_20,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr7 scaffold_20, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (27%)
Length = 362
Score = 379 bits (191), Expect = e-105
Identities = 194/195 (99%)
Strand = Plus / Plus
Query: 1 atggataggtatcagagggtggagaagcccaaggcagatagtcctatcaacgagaacgag 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 168 atggataggtatcagagggtggagaagcccaaggcagatagtcctatcaacgagaacgag 227
Query: 61 atacgcattaccagtcaaggaaggatgaggaattacatcacctacgccaccactctcctt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 228 atacgcattaccagtcaaggaaggatgaggaattacatcacctacgccaccactctcctt 287
Query: 121 caggagaagggatctgatgaaattgttctcaaagcaatgggacgtgcaataaataagact 180
|||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 288 caggagaagggatctgatgaaattgttctccaagcaatgggacgtgcaataaataagact 347
Query: 181 gtaatgattactgag 195
|||||||||||||||
Sbjct: 348 gtaatgattactgag 362
>gnl|LJGI|BW612687 similar to UniRef100_A7PKW8 Cluster: Chromosome chr7 scaffold_20,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr7 scaffold_20, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (49%)
Length = 475
Score = 95.6 bits (48), Expect = 2e-19
Identities = 198/248 (79%)
Strand = Plus / Plus
Query: 55 aacgagatacgcattaccagtcaaggaaggatgaggaattacatcacctacgccaccact 114
|||||||| || ||||| ||||| || |||||| | || ||||| || ||||||| ||
Sbjct: 177 aacgagatccggattactagtcaggggaggatgcgcaactacattacttacgccatgacc 236
Query: 115 ctccttcaggagaagggatctgatgaaattgttctcaaagcaatgggacgtgcaataaat 174
| |||||||| || || ||| ||||||||||| ||||||||||||| | || || ||
Sbjct: 237 ttgcttcaggaaaaaggttctaatgaaattgttttcaaagcaatggggagagctatcaac 296
Query: 175 aagactgtaatgattactgagctgatcaagagaaggattgttggtctgcaccagaacact 234
||||| || | ||| ||| |||||||||| |||||||| ||||| |||||||| ||
Sbjct: 297 aagacagtgacaattgtggagttgatcaagaggaggattgtgggtctccaccagaataca 356
Query: 235 ctgattggatcaactgatataactgacacatgggaaccactagaagaaggccttcttcct 294
|||||||| ||||| || ||||| |||||||| ||||| || |||||||| ||||||
Sbjct: 357 gcaattggatccactgacatcactgatacatgggagccacttgaggaaggcctccttcct 416
Query: 295 ttggagac 302
||||||||
Sbjct: 417 ttggagac 424
>gnl|LJGI|TC74094 similar to UniRef100_A7Q792 Cluster: Chromosome chr18 scaffold_59,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr18 scaffold_59, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (74%)
Length = 1199
Score = 95.6 bits (48), Expect = 2e-19
Identities = 198/248 (79%)
Strand = Plus / Plus
Query: 55 aacgagatacgcattaccagtcaaggaaggatgaggaattacatcacctacgccaccact 114
|||||||| || ||||| ||||| || |||||| | || ||||| || ||||||| ||
Sbjct: 153 aacgagatccggattactagtcaggggaggatgcgcaactacattacttacgccatgacc 212
Query: 115 ctccttcaggagaagggatctgatgaaattgttctcaaagcaatgggacgtgcaataaat 174
| |||||||| || || ||| ||||||||||| ||||||||||||| | || || ||
Sbjct: 213 ttgcttcaggaaaaaggttctaatgaaattgttttcaaagcaatggggagagctatcaac 272
Query: 175 aagactgtaatgattactgagctgatcaagagaaggattgttggtctgcaccagaacact 234
||||| || | ||| ||| |||||||||| |||||||| ||||| |||||||| ||
Sbjct: 273 aagacagtgacaattgtggagttgatcaagaggaggattgtgggtctccaccagaataca 332
Query: 235 ctgattggatcaactgatataactgacacatgggaaccactagaagaaggccttcttcct 294
|||||||| ||||| || ||||| |||||||| ||||| || |||||||| ||||||
Sbjct: 333 gcaattggatccactgacatcactgatacatgggagccacttgaggaaggcctccttcct 392
Query: 295 ttggagac 302
||||||||
Sbjct: 393 ttggagac 400