Miyakogusa Predicted Gene
- Lj1g3v1219090.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj1g3v1219090.1 Non Chatacterized Hit- tr|G3TBZ3|G3TBZ3_LOXAF
Uncharacterized protein OS=Loxodonta africana
GN=PDCD2,27.27,2e-18,seg,NULL; PDCD2_C,Programmed cell death protein
2, C-terminal; PCDC2-RELATED,NULL; PCDC2 (PROGRAMMED,CUFF.26999.1
(1104 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC60909 similar to UniRef100_A7PL09 Cluster: Chromosome... 1316 0.0
gnl|LJGI|BP068835 similar to UniRef100_A7PL09 Cluster: Chromosom... 210 1e-53
>gnl|LJGI|TC60909 similar to UniRef100_A7PL09 Cluster: Chromosome chr7 scaffold_20,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr7 scaffold_20, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (18%)
Length = 778
Score = 1316 bits (664), Expect = 0.0
Identities = 667/668 (99%)
Strand = Plus / Plus
Query: 1 atgggcggtgcagttttgctcggcatgccggggccatgggctgacgactatcgcgaacct 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 111 atgggcggtgcagttttgctcggcatgccggggccatgggctgacgactatcgcgaacct 170
Query: 61 tccgatccctacacaaccaaaatcggaggcctccctgattggcccattcccatcaatggc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 171 tccgatccctacacaaccaaaatcggaggcctccctgattggcccattcccatcaatggc 230
Query: 121 gatttgctccggtgcggtggttgtgactgcacactctgccttgtagcacaggtttatgct 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 231 gatttgctccggtgcggtggttgtgactgcacactctgccttgtagcacaggtttatgct 290
Query: 181 ccactcccgtcatctcagcatcgcgctcttttcgttttgggttgtctttcgccgaaatgc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 291 ccactcccgtcatctcagcatcgcgctcttttcgttttgggttgtctttcgccgaaatgc 350
Query: 241 ggaacccgctggcgagtttttcgagttcagaagaatggtgacgatgtggagagctttaag 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 351 ggaacccgctggcgagtttttcgagttcagaagaatggtgacgatgtggagagctttaag 410
Query: 301 cacagcgaggttcagcttcaaaatgctgaattgtgcgaagatgttgatgaagatgaaggt 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 411 cacagcgaggttcagcttcaaaatgctgaattgtgcgaagatgttgatgaagatgaaggt 470
Query: 361 gaaatggatttggcgcaactgggcaaggcgctatttgaagctgggactttggctgcttct 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 471 gaaatggatttggcgcaactgggcaaggcgctatttgaagctgggactttggctgcttct 530
Query: 421 aatagtaaaagcaagaaaccaaggagaagaagacaacacaaatcctctgctgcttgttct 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 531 aatagtaaaagcaagaaaccaaggagaagaagacaacacaaatcctctgctgcttgttct 590
Query: 481 ccatgtacagccgcagcagcaactctagtttgtgatgataatcatattgatatgccagtg 540
||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 591 ccatgtacagcagcagcagcaactctagtttgtgatgataatcatattgatatgccagtg 650
Query: 541 gttccttgcttttatatgtacacacaagaagagccatctacaggggatctgagttctata 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 651 gttccttgcttttatatgtacacacaagaagagccatctacaggggatctgagttctata 710
Query: 601 tgctctaactatgcgtcgctttctattaaggagaacaaaagtgatgttgaggatcattca 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 711 tgctctaactatgcgtcgctttctattaaggagaacaaaagtgatgttgaggatcattca 770
Query: 661 gaaccaga 668
||||||||
Sbjct: 771 gaaccaga 778
>gnl|LJGI|BP068835 similar to UniRef100_A7PL09 Cluster: Chromosome chr7 scaffold_20,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr7 scaffold_20, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (6%)
Length = 419
Score = 210 bits (106), Expect = 1e-53
Identities = 116/118 (98%), Gaps = 1/118 (0%)
Strand = Plus / Minus
Query: 988 tgtgaagagactgaactagcgaagtccaatagtaaggggtggattgtagcagaggaggct 1047
||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 419 tgtgaagagactgaactagcgaagtccaatactaaggggtggattgtagcagaggaggct 360
Query: 1048 gttgtggctcagaatgaggaatccttgcctattca-gcttggctatttctcgtgattg 1104
||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 359 gttgtggctcagaatgaggaatccttgcctattcacgcttggctatttctcgtgattg 302