Miyakogusa Predicted Gene

Lj1g3v1219070.1
Show Alignment:  

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj1g3v1219070.1 tr|D5GDP3|D5GDP3_TUBMM Structural maintenance of
chromosomes protein OS=Tuber melanosporum (strain
M,33.33,0.008,seg,NULL,BW625025.path4.1
         (369 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|BW625025 similar to UniRef100_Q8WNY9 Cluster: Sperm pro...   716   0.0  

>gnl|LJGI|BW625025 similar to UniRef100_Q8WNY9 Cluster: Sperm protamine-P1; n=1;
           Chalinolobus beatrix|Rep: Sperm protamine-P1 -
           Chalinolobus beatrix (Beatrix's bat), partial (57%)
          Length = 470

 Score =  716 bits (361), Expect = 0.0
 Identities = 367/369 (99%)
 Strand = Plus / Plus

                                                                       
Query: 1   atgactgttatctacaatcaaaccacctattacacaatctctgaagtggaagccatggtg 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 101 atgactgttatctacaatcaaaccacctattacacaatctctgaagtggaagccatggtg 160

                                                                       
Query: 61  atctctcatgaagcgcggtttgacaggatgcggaagaagcaactcgcagaaaccactcct 120
           ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 161 atctctcatgaagcgcggtttgacaggatgcggaagaagaaactcgcagaaaccactcct 220

                                                                       
Query: 121 tcggtgtttctgacgcaagcgacagcgccgtctgcgtcttctacaacaccggcgccgccg 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 221 tcggtgtttctgacgcaagcgacagcgccgtctgcgtcttctacaacaccggcgccgccg 280

                                                                       
Query: 181 ccacaagctttgtggactcagcctgctccagcgccgccgccaccagcgacgcaacctcca 240
           ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 281 ccacaagctttgtggactcagcctgctccggcgccgccgccaccagcgacgcaacctcca 340

                                                                       
Query: 241 gcgacagctgtcgctcctttccagccagtcgatgctgctgttgactctggttatgggaat 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 341 gcgacagctgtcgctcctttccagccagtcgatgctgctgttgactctggttatgggaat 400

                                                                       
Query: 301 cgcgatgatcaaaatcgcaattctggaaactatggcagaggacgcgggcgcggaagagga 360
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 401 cgcgatgatcaaaatcgcaattctggaaactatggcagaggacgcgggcgcggaagagga 460

                    
Query: 361 cgcaatgtc 369
           |||||||||
Sbjct: 461 cgcaatgtc 469