Miyakogusa Predicted Gene

Lj1g3v1219020.1

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj1g3v1219020.1 Non Chatacterized Hit- tr|I3SBT6|I3SBT6_MEDTR
Uncharacterized protein OS=Medicago truncatula PE=4
SV,68.06,2e-19,AvrRpt-cleavage,Pathogenic type III effector avirulence
factor Avr cleavage site; seg,NULL,CUFF.26997.1
         (309 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|TC62408 similar to UniRef100_Q9FIB1 Cluster: Emb|CAB617...   613   e-175
gnl|LJGI|TC73443 similar to UniRef100_Q9FIB1 Cluster: Emb|CAB617...   143   7e-34
gnl|LJGI|BP039186 similar to UniRef100_Q9FIB1 Cluster: Emb|CAB61...    96   2e-19
gnl|LJGI|AU252049 homologue to UniRef100_Q4ABM1 Cluster: 80C09_1...    94   6e-19

>gnl|LJGI|TC62408 similar to UniRef100_Q9FIB1 Cluster: Emb|CAB61744.1; n=1;
           Arabidopsis thaliana|Rep: Emb|CAB61744.1 - Arabidopsis
           thaliana (Mouse-ear cress), partial (65%)
          Length = 706

 Score =  613 bits (309), Expect = e-175
 Identities = 309/309 (100%)
 Strand = Plus / Plus

                                                                       
Query: 1   atggaccaaagtaaggagaaaaatgccccttggctatcagttccacagtttggggactgg 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 88  atggaccaaagtaaggagaaaaatgccccttggctatcagttccacagtttggggactgg 147

                                                                       
Query: 61  gatcagaagggtccattgccagattactcaatggatttctcaaaaatccgggaaatgagg 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 148 gatcagaagggtccattgccagattactcaatggatttctcaaaaatccgggaaatgagg 207

                                                                       
Query: 121 aagcaaaacaagacaaacatttcaagggcaagtcttggcaatgaagaggagctcacagca 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 208 aagcaaaacaagacaaacatttcaagggcaagtcttggcaatgaagaggagctcacagca 267

                                                                       
Query: 181 tctaccacgagcagcagtataaacactggccacactgagccccagcagcactctaactac 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 268 tctaccacgagcagcagtataaacactggccacactgagccccagcagcactctaactac 327

                                                                       
Query: 241 caccaagctaactctcccactacaaggaggagctttttcagctacttcaactgttgtgta 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 328 caccaagctaactctcccactacaaggaggagctttttcagctacttcaactgttgtgta 387

                    
Query: 301 aaagcctga 309
           |||||||||
Sbjct: 388 aaagcctga 396


>gnl|LJGI|TC73443 similar to UniRef100_Q9FIB1 Cluster: Emb|CAB61744.1; n=1;
           Arabidopsis thaliana|Rep: Emb|CAB61744.1 - Arabidopsis
           thaliana (Mouse-ear cress), partial (61%)
          Length = 472

 Score =  143 bits (72), Expect = 7e-34
 Identities = 132/152 (86%)
 Strand = Plus / Plus

                                                                       
Query: 16  gagaaaaatgccccttggctatcagttccacagtttggggactgggatcagaagggtcca 75
           ||||||| ||| |||||||| ||||| ||||||||||| ||||||||||||||||| | |
Sbjct: 75  gagaaaactgctccttggctgtcagtgccacagtttggagactgggatcagaagggccaa 134

                                                                       
Query: 76  ttgccagattactcaatggatttctcaaaaatccgggaaatgaggaagcaaaacaagaca 135
            | || ||||||||| | ||||||||||||||||| || |  |||||||| |||||||| 
Sbjct: 135 gtcccggattactcacttgatttctcaaaaatccgtgagactaggaagcagaacaagacc 194

                                           
Query: 136 aacatttcaagggcaagtcttggcaatgaaga 167
           |||||||| |||||||||||||| ||||||||
Sbjct: 195 aacatttccagggcaagtcttggtaatgaaga 226



 Score = 50.1 bits (25), Expect = 8e-06
 Identities = 37/41 (90%)
 Strand = Plus / Plus

                                                    
Query: 265 aggaggagctttttcagctacttcaactgttgtgtaaaagc 305
           |||| ||||||  |||||||||||||||||||||| |||||
Sbjct: 321 aggaagagcttcctcagctacttcaactgttgtgtgaaagc 361


>gnl|LJGI|BP039186 similar to UniRef100_Q9FIB1 Cluster: Emb|CAB61744.1; n=1;
           Arabidopsis thaliana|Rep: Emb|CAB61744.1 - Arabidopsis
           thaliana (Mouse-ear cress), partial (14%)
          Length = 511

 Score = 95.6 bits (48), Expect = 2e-19
 Identities = 48/48 (100%)
 Strand = Plus / Minus

                                                           
Query: 262 acaaggaggagctttttcagctacttcaactgttgtgtaaaagcctga 309
           ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 313 acaaggaggagctttttcagctacttcaactgttgtgtaaaagcctga 266


>gnl|LJGI|AU252049 homologue to UniRef100_Q4ABM1 Cluster: 80C09_15; n=1; Brassica rapa
           subsp. pekinensis|Rep: 80C09_15 - Brassica rapa subsp.
           pekinensis (Chinese cabbage), partial (27%)
          Length = 286

 Score = 93.7 bits (47), Expect = 6e-19
 Identities = 83/95 (87%)
 Strand = Plus / Plus

                                                                       
Query: 16  gagaaaaatgccccttggctatcagttccacagtttggggactgggatcagaagggtcca 75
           ||||||| ||| |||||||| ||||| ||||||||||| ||||||||||||||||| | |
Sbjct: 183 gagaaaactgctccttggctgtcagtgccacagtttggagactgggatcagaagggccaa 242

                                              
Query: 76  ttgccagattactcaatggatttctcaaaaatccg 110
            | || ||||||||| | |||||||||||||||||
Sbjct: 243 gtcccggattactcacttgatttctcaaaaatccg 277