Miyakogusa Predicted Gene
- Lj1g3v1218980.2
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj1g3v1218980.2 Non Chatacterized Hit- tr|I3SYZ9|I3SYZ9_LOTJA
Uncharacterized protein OS=Lotus japonicus PE=2
SV=1,96.99,0,SHIKIMATE_KINASE,Shikimate kinase, conserved site; no
description,NULL; SKI,Shikimate kinase; SHIKIM,CUFF.27034.2
(900 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC64187 weakly similar to UniRef100_Q3EBW8 Cluster: Unc... 1776 0.0
gnl|LJGI|GO020909 weakly similar to UniRef100_Q00497 Cluster: Sh... 967 0.0
gnl|LJGI|DC594806 similar to UniRef100_Q0J9N6 Cluster: Os04g0640... 763 0.0
gnl|LJGI|TC60322 similar to UniRef100_Q3EBW8 Cluster: Uncharacte... 365 e-100
gnl|LJGI|TC75073 similar to UniRef100_Q3EBW8 Cluster: Uncharacte... 248 5e-65
gnl|LJGI|TC68344 weakly similar to UniRef100_Q00497 Cluster: Shi... 137 1e-31
gnl|LJGI|BP068129 UniRef100_Q24NI1 Cluster: Sensor protein; n=1;... 117 1e-25
gnl|LJGI|CB828600 weakly similar to UniRef100_Q6PLR3 Cluster: Sh... 90 3e-17
>gnl|LJGI|TC64187 weakly similar to UniRef100_Q3EBW8 Cluster: Uncharacterized protein
At2g21940.2; n=1; Arabidopsis thaliana|Rep:
Uncharacterized protein At2g21940.2 - Arabidopsis
thaliana (Mouse-ear cress), partial (68%)
Length = 1281
Score = 1776 bits (896), Expect = 0.0
Identities = 899/900 (99%)
Strand = Plus / Plus
Query: 1 atggaagctaaagcggttcacagctttcacttgtcgaccatggtggtcggagacaagctc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 51 atggaagctaaagcggttcacagctttcacttgtcgaccatggtggtcggagacaagctc 110
Query: 61 ggaagaacaggaccaagcagttctctgagaatgtctagtggttttgtgaagccgaagaag 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 111 ggaagaacaggaccaagcagttctctgagaatgtctagtggttttgtgaagccgaagaag 170
Query: 121 tttcagggttttgtttcgcataggttgtcattattgcaaaggagtcagcaaagaacggtt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 171 tttcagggttttgtttcgcataggttgtcattattgcaaaggagtcagcaaagaacggtt 230
Query: 181 cctgttgtggttgcatgttcctcgtacaacaatattccagcttctatattggaaactggg 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 231 cctgttgtggttgcatgttcctcgtacaacaatattccagcttctatattggaaactggg 290
Query: 241 agctttcgtgatcctcttgatgaagaaatgattttgaagagtaaatcacaagagatcgag 300
|||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 291 agctttcgtggtcctcttgatgaagaaatgattttgaagagtaaatcacaagagatcgag 350
Query: 301 ccatatttaaatggacgttgtatatatcttgttggaatgatgggatctgggaagacaact 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 351 ccatatttaaatggacgttgtatatatcttgttggaatgatgggatctgggaagacaact 410
Query: 361 gtggggaagattttatcagaagtgctttcttattcctttttcgacagtgatgcattgatc 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 411 gtggggaagattttatcagaagtgctttcttattcctttttcgacagtgatgcattgatc 470
Query: 421 gaggaggaggttgataaaacttctgtagctgatatattcaagaactatggggaggctttt 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 471 gaggaggaggttgataaaacttctgtagctgatatattcaagaactatggggaggctttt 530
Query: 481 ttccgtaataaggagacagagatactgaagaagctgtcaatgatgcgaagatatgttatt 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 531 ttccgtaataaggagacagagatactgaagaagctgtcaatgatgcgaagatatgttatt 590
Query: 541 tcaactggtggaggtgctgttgtgaagcccatcaattggaaatatatgcataaggggatt 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 591 tcaactggtggaggtgctgttgtgaagcccatcaattggaaatatatgcataaggggatt 650
Query: 601 agtgtttggttggatgtacctgtagaagccttggctcggagaataacaaaagtaggaact 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 651 agtgtttggttggatgtacctgtagaagccttggctcggagaataacaaaagtaggaact 710
Query: 661 aattctcgccctcttctacattatgaagctggagatgcatatacaaagactttcatgcgt 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 711 aattctcgccctcttctacattatgaagctggagatgcatatacaaagactttcatgcgt 770
Query: 721 ttgtcttctctttttgaagaaagaagcgaagcatatgccaatgccaatgccagggtctcc 780
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 771 ttgtcttctctttttgaagaaagaagcgaagcatatgccaatgccaatgccagggtctcc 830
Query: 781 ttggaaaatatagcagcaaaactggaccaaaaagatgcgtcgcatttatctccaaagact 840
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 831 ttggaaaatatagcagcaaaactggaccaaaaagatgcgtcgcatttatctccaaagact 890
Query: 841 attgcaatcgaggcactagaacaaatcaatgggtttctaaagggtgaagatggctgttaa 900
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 891 attgcaatcgaggcactagaacaaatcaatgggtttctaaagggtgaagatggctgttaa 950
>gnl|LJGI|GO020909 weakly similar to UniRef100_Q00497 Cluster: Shikimate kinase,
chloroplast precursor; n=1; Solanum lycopersicum|Rep:
Shikimate kinase, chloroplast precursor - Solanum
lycopersicum (Tomato) (Lycopersicon esculentum), partial
(30%)
Length = 609
Score = 967 bits (488), Expect = 0.0
Identities = 488/488 (100%)
Strand = Plus / Plus
Query: 1 atggaagctaaagcggttcacagctttcacttgtcgaccatggtggtcggagacaagctc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 122 atggaagctaaagcggttcacagctttcacttgtcgaccatggtggtcggagacaagctc 181
Query: 61 ggaagaacaggaccaagcagttctctgagaatgtctagtggttttgtgaagccgaagaag 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 182 ggaagaacaggaccaagcagttctctgagaatgtctagtggttttgtgaagccgaagaag 241
Query: 121 tttcagggttttgtttcgcataggttgtcattattgcaaaggagtcagcaaagaacggtt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 242 tttcagggttttgtttcgcataggttgtcattattgcaaaggagtcagcaaagaacggtt 301
Query: 181 cctgttgtggttgcatgttcctcgtacaacaatattccagcttctatattggaaactggg 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 302 cctgttgtggttgcatgttcctcgtacaacaatattccagcttctatattggaaactggg 361
Query: 241 agctttcgtgatcctcttgatgaagaaatgattttgaagagtaaatcacaagagatcgag 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 362 agctttcgtgatcctcttgatgaagaaatgattttgaagagtaaatcacaagagatcgag 421
Query: 301 ccatatttaaatggacgttgtatatatcttgttggaatgatgggatctgggaagacaact 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 422 ccatatttaaatggacgttgtatatatcttgttggaatgatgggatctgggaagacaact 481
Query: 361 gtggggaagattttatcagaagtgctttcttattcctttttcgacagtgatgcattgatc 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 482 gtggggaagattttatcagaagtgctttcttattcctttttcgacagtgatgcattgatc 541
Query: 421 gaggaggaggttgataaaacttctgtagctgatatattcaagaactatggggaggctttt 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 542 gaggaggaggttgataaaacttctgtagctgatatattcaagaactatggggaggctttt 601
Query: 481 ttccgtaa 488
||||||||
Sbjct: 602 ttccgtaa 609
>gnl|LJGI|DC594806 similar to UniRef100_Q0J9N6 Cluster: Os04g0640600 protein; n=1;
Oryza sativa Japonica Group|Rep: Os04g0640600 protein -
Oryza sativa subsp. japonica (Rice), partial (17%)
Length = 576
Score = 763 bits (385), Expect = 0.0
Identities = 398/401 (99%), Gaps = 1/401 (0%)
Strand = Plus / Plus
Query: 1 atggaagctaaagcggttcacagctttcacttgtcgaccatggtggtcggagacaagctc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 177 atggaagctaaagcggttcacagctttcacttgtcgaccatggtggtcggagacaagctc 236
Query: 61 ggaagaacaggaccaagcagttctctgagaatgtctagtggttttgtgaagccgaagaag 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 237 ggaagaacaggaccaagcagttctctgagaatgtctagtggttttgtgaagccgaagaag 296
Query: 121 tttcagggttttgtttcgcataggttgtcattattgcaaaggagtcagcaaagaacggtt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 297 tttcagggttttgtttcgcataggttgtcattattgcaaaggagtcagcaaagaacggtt 356
Query: 181 cctgttgtggttgcatgttcctcgtacaacaatattccagcttctatattggaaactggg 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 357 cctgttgtggttgcatgttcctcgtacaacaatattccagcttctatattggaaactggg 416
Query: 241 agctttcgtgatcctcttgatgaagaaatgattttgaagagtaaatcacaagagatcgag 300
|||||||||| ||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 417 agctttcgtggtcctcttgatgaagaaatgattttgaagagt-aatcacaagagatcgag 475
Query: 301 ccatatttaaatggacgttgtatatatcttgttggaatgatgggatctgggaagacaact 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 476 ccatatttaaatggacgttgtatatatcttgttggaatgatgggatctgggaagacaact 535
Query: 361 gtggggaagattttatcagaagtgctttcttattccttttt 401
|||||| ||||||||||||||||||||||||||||||||||
Sbjct: 536 gtgggggagattttatcagaagtgctttcttattccttttt 576
>gnl|LJGI|TC60322 similar to UniRef100_Q3EBW8 Cluster: Uncharacterized protein
At2g21940.2; n=1; Arabidopsis thaliana|Rep:
Uncharacterized protein At2g21940.2 - Arabidopsis
thaliana (Mouse-ear cress), partial (64%)
Length = 1094
Score = 365 bits (184), Expect = e-100
Identities = 535/652 (82%)
Strand = Plus / Plus
Query: 215 ttccagcttctatattggaaactgggagctttcgtgatcctcttgatgaagaaatgattt 274
|||||||||| | ||||||| |||| ||| |||| |||||| ||||| || |||||
Sbjct: 76 ttccagcttcgacattggaatctggaagccgccgtgctcctctcgatgatgagttgattc 135
Query: 275 tgaagagtaaatcacaagagatcgagccatatttaaatggacgttgtatatatcttgttg 334
|| ||| || |||||||||||| ||||||||||||||||||| || ||||| |||||||
Sbjct: 136 tggagaataggtcacaagagatccagccatatttaaatggacgctgcatataccttgttg 195
Query: 335 gaatgatgggatctgggaagacaactgtggggaagattttatcagaagtgctttcttatt 394
|||||||||| || ||||||||||||||||||||||| | ||| ||||||| ||||
Sbjct: 196 gaatgatgggctccgggaagacaactgtggggaagatcatgtcaaaagtgctaggttatg 255
Query: 395 cctttttcgacagtgatgcattgatcgaggaggaggttgataaaacttctgtagctgata 454
|||| || |||||||||||| | ||||| ||||||| | | ||||| |||||||
Sbjct: 256 aattttgtgatagtgatgcattggtggaggaagaggttggtgggaactctgtggctgata 315
Query: 455 tattcaagaactatggggaggcttttttccgtaataaggagacagagatactgaagaagc 514
||||||| |||||| || |||| || ||| |||| ||||||||| | || | |||
Sbjct: 316 tattcaacctctatggtgaatctttctttcgtgataaagagacagaggcattgcataagt 375
Query: 515 tgtcaatgatgcgaagatatgttatttcaactggtggaggtgctgttgtgaagcccatca 574
|||| ||||||| ||| || || |||| |||||||||||||||||| ||| ||||||||
Sbjct: 376 tgtccatgatgcatagacatattgtttctactggtggaggtgctgttatgaggcccatca 435
Query: 575 attggaaatatatgcataaggggattagtgtttggttggatgtacctgtagaagccttgg 634
|||||||||||||||| ||||||||||||||||||||||||||||| || ||||| ||||
Sbjct: 436 attggaaatatatgcacaaggggattagtgtttggttggatgtaccagtggaagcgttgg 495
Query: 635 ctcggagaataacaaaagtaggaactaattctcgccctcttctacattatgaagctggag 694
| | ||||| || ||||||||||||||||||||| |||||||||||||| || || |
Sbjct: 496 cacaaagaattgcagcagtaggaactaattctcgcccccttctacattatgaggcagggg 555
Query: 695 atgcatatacaaagactttcatgcgtttgtcttctctttttgaagaaagaagcgaagcat 754
||||||| |||| | |||| |||||||||||| |||| |||||||| ||| | ||||| |
Sbjct: 556 atgcatacacaagggctttgatgcgtttgtctgctctctttgaagagagaggtgaagcct 615
Query: 755 atgccaatgccaatgccagggtctccttggaaaatatagcagcaaaactggaccaaaaag 814
||||||| |||| |||||||||||| || ||||| ||||| |||||| || ||||| ||
Sbjct: 616 atgccaacgccagtgccagggtctcattagaaaagatagctacaaaacggggccaaagag 675
Query: 815 atgcgtcgcatttatctccaaagactattgcaatcgaggcactagaacaaat 866
||| || |||| ||||||| | |||||||| ||||||||||| |||||
Sbjct: 676 atgtgttagatttgtctccaactgcaattgcaattgaggcactagagcaaat 727
>gnl|LJGI|TC75073 similar to UniRef100_Q3EBW8 Cluster: Uncharacterized protein
At2g21940.2; n=1; Arabidopsis thaliana|Rep:
Uncharacterized protein At2g21940.2 - Arabidopsis
thaliana (Mouse-ear cress), partial (59%)
Length = 1138
Score = 248 bits (125), Expect = 5e-65
Identities = 269/317 (84%)
Strand = Plus / Plus
Query: 550 ggaggtgctgttgtgaagcccatcaattggaaatatatgcataaggggattagtgtttgg 609
|||||||||||| ||| |||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 630 ggaggtgctgttatgaggcccatcaattggaaatatatgcacaaggggattagtgtttgg 689
Query: 610 ttggatgtacctgtagaagccttggctcggagaataacaaaagtaggaactaattctcgc 669
||||||||||| || ||||| ||||| | ||||| || |||||||||||||||||||
Sbjct: 690 ttggatgtaccagtggaagcgttggcacaaagaattgcagcagtaggaactaattctcgc 749
Query: 670 cctcttctacattatgaagctggagatgcatatacaaagactttcatgcgtttgtcttct 729
|| |||||||||||||| || || |||||||| |||| | |||| |||||||||||| ||
Sbjct: 750 ccccttctacattatgaggcaggggatgcatacacaagggctttgatgcgtttgtctgct 809
Query: 730 ctttttgaagaaagaagcgaagcatatgccaatgccaatgccagggtctccttggaaaat 789
|| |||||||| ||| | ||||| |||||||| |||| |||||||||||| || |||||
Sbjct: 810 ctctttgaagagagaggtgaagcctatgccaacgccagtgccagggtctcattagaaaag 869
Query: 790 atagcagcaaaactggaccaaaaagatgcgtcgcatttatctccaaagactattgcaatc 849
||||| |||||| || ||||| ||||| || |||| ||||||| | ||||||||
Sbjct: 870 atagctacaaaacggggccaaagagatgtgttagatttgtctccaactgcaattgcaatt 929
Query: 850 gaggcactagaacaaat 866
||||||||||| |||||
Sbjct: 930 gaggcactagagcaaat 946
Score = 137 bits (69), Expect = 1e-31
Identities = 135/157 (85%)
Strand = Plus / Plus
Query: 215 ttccagcttctatattggaaactgggagctttcgtgatcctcttgatgaagaaatgattt 274
|||||||||| | ||||||| |||| ||| |||| |||||| ||||| || ||||||
Sbjct: 372 ttccagcttcgacattggaatctggaagccgccgtgctcctctcgatgatgagttgattt 431
Query: 275 tgaagagtaaatcacaagagatcgagccatatttaaatggacgttgtatatatcttgttg 334
|||||| || |||||||||||| ||||||||||||||||||| || ||||| |||||||
Sbjct: 432 tgaagaataggtcacaagagatccagccatatttaaatggacgctgcatataccttgttg 491
Query: 335 gaatgatgggatctgggaagacaactgtggggaagat 371
|| ||||||| || |||||||||||||||||||||||
Sbjct: 492 gagtgatgggctccgggaagacaactgtggggaagat 528
>gnl|LJGI|TC68344 weakly similar to UniRef100_Q00497 Cluster: Shikimate kinase,
chloroplast precursor; n=1; Solanum lycopersicum|Rep:
Shikimate kinase, chloroplast precursor - Solanum
lycopersicum (Tomato) (Lycopersicon esculentum), partial
(30%)
Length = 754
Score = 137 bits (69), Expect = 1e-31
Identities = 135/157 (85%)
Strand = Plus / Plus
Query: 215 ttccagcttctatattggaaactgggagctttcgtgatcctcttgatgaagaaatgattt 274
|||||||||| | ||||||| |||| ||| |||| |||||| ||||| || |||||
Sbjct: 421 ttccagcttcgacattggaatctggaagccgccgtgctcctctcgatgatgagttgattc 480
Query: 275 tgaagagtaaatcacaagagatcgagccatatttaaatggacgttgtatatatcttgttg 334
|||||| || |||||||||||| ||||||||||||||||||| || ||||| |||||||
Sbjct: 481 tgaagaataggtcacaagagatccagccatatttaaatggacgctgcatataccttgttg 540
Query: 335 gaatgatgggatctgggaagacaactgtggggaagat 371
|||||||||| || |||||||||||||||||||||||
Sbjct: 541 gaatgatgggctccgggaagacaactgtggggaagat 577
>gnl|LJGI|BP068129 UniRef100_Q24NI1 Cluster: Sensor protein; n=1; Desulfitobacterium
hafniense Y51|Rep: Sensor protein -, partial (2%)
Length = 490
Score = 117 bits (59), Expect = 1e-25
Identities = 147/166 (88%), Gaps = 9/166 (5%)
Strand = Plus / Minus
Query: 741 aagaagcgaagcatatgccaatgccaatgccagggtctccttggaaaatatagcagcaaa 800
|||||||||||||||||||| |||| ||||| ||||||||| || |||||||||||| ||
Sbjct: 490 aagaagcgaagcatatgcca-tgcccatgcccgggtctcct-ggcaaatatagcagccaa 433
Query: 801 ac-tggaccaaaaagatgcgtcgcatttatctccaaagac--tattgcaatcga-ggcac 856
|| |||||| |||||||||||||||||||||||| ||||| ||||| ||||| |||||
Sbjct: 432 acctggacccaaaagatgcgtcgcatttatctcccaagacctaattgc-atcgacggcac 374
Query: 857 tagaacaaatca-atggg-tttctaaagggtgaagatggctgttaa 900
||| |||||||| ||||| ||| || ||||||||||||||||||||
Sbjct: 373 tagcacaaatcacatgggctttgtatagggtgaagatggctgttaa 328
>gnl|LJGI|CB828600 weakly similar to UniRef100_Q6PLR3 Cluster: Shikimate kinase; n=1;
Cucumis sativus|Rep: Shikimate kinase - Cucumis sativus
(Cucumber), partial (39%)
Length = 537
Score = 89.7 bits (45), Expect = 3e-17
Identities = 129/157 (82%)
Strand = Plus / Plus
Query: 710 ctttcatgcgtttgtcttctctttttgaagaaagaagcgaagcatatgccaatgccaatg 769
|||| |||||||||||| |||| |||||||| ||| | ||||| |||||||| |||| ||
Sbjct: 190 ctttgatgcgtttgtctgctctctttgaagagagaggtgaagcctatgccaacgccagtg 249
Query: 770 ccagggtctccttggaaaatatagcagcaaaactggaccaaaaagatgcgtcgcatttat 829
|||||||||| || ||||| ||||| |||||| || ||||| ||||| || |||| |
Sbjct: 250 ccagggtctcattagaaaagatagctacaaaacggggccaaagagatgtgttagatttgt 309
Query: 830 ctccaaagactattgcaatcgaggcactagaacaaat 866
|||||| | |||||||| ||||||||||| |||||
Sbjct: 310 ctccaactgcaattgcaattgaggcactagagcaaat 346