Miyakogusa Predicted Gene
- Lj1g3v1207840.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj1g3v1207840.1 tr|B9NEF4|B9NEF4_POPTR Predicted protein
OS=Populus trichocarpa GN=POPTRDRAFT_680128 PE=4
SV=1,83.67,0.000000000000001,SUBFAMILY NOT NAMED,NULL; FAMILY NOT
NAMED,NULL; Protein kinase-like (PK-like),Protein kinase-like
d,gene.g31006.t1.1
(393 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC68467 similar to UniRef100_A7PL28 Cluster: Chromosome... 777 0.0
gnl|LJGI|AV780551 similar to UniRef100_Q4ABR6 Cluster: 80A08_1; ... 285 1e-76
>gnl|LJGI|TC68467 similar to UniRef100_A7PL28 Cluster: Chromosome chr7 scaffold_20,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr7 scaffold_20, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (12%)
Length = 653
Score = 777 bits (392), Expect = 0.0
Identities = 392/392 (100%)
Strand = Plus / Plus
Query: 2 tgacaccagcaggaattgcagagcagatactaaaccttggagcgctcggataccgtgctc 61
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 tgacaccagcaggaattgcagagcagatactaaaccttggagcgctcggataccgtgctc 60
Query: 62 cggaactcgcaactgcatccaaaccagttccatcttttaaggctgatgtctatgcacttg 121
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 cggaactcgcaactgcatccaaaccagttccatcttttaaggctgatgtctatgcacttg 120
Query: 122 gagtgatcctaatggaattgttaacgagaaaaagcgcaggtgacataatatcagggcaat 181
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 gagtgatcctaatggaattgttaacgagaaaaagcgcaggtgacataatatcagggcaat 180
Query: 182 caggtgctgttgatctcacagattgggttaggctgtgtgaaagagaagggagggtaatgg 241
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 caggtgctgttgatctcacagattgggttaggctgtgtgaaagagaagggagggtaatgg 240
Query: 242 attgtatagacagagacattgcaggtggtgaagaatcctccaaagagatggaccaattgc 301
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 attgtatagacagagacattgcaggtggtgaagaatcctccaaagagatggaccaattgc 300
Query: 302 ttgcaacatctctcaggtgtatcctccctgtacatgaaaggcctaacatcagacaagttt 361
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 ttgcaacatctctcaggtgtatcctccctgtacatgaaaggcctaacatcagacaagttt 360
Query: 362 ttgacgagctctgttctatatcatcagcttga 393
||||||||||||||||||||||||||||||||
Sbjct: 361 ttgacgagctctgttctatatcatcagcttga 392
>gnl|LJGI|AV780551 similar to UniRef100_Q4ABR6 Cluster: 80A08_1; n=1; Brassica rapa
subsp. pekinensis|Rep: 80A08_1 - Brassica rapa subsp.
pekinensis (Chinese cabbage), partial (8%)
Length = 618
Score = 285 bits (144), Expect = 1e-76
Identities = 170/176 (96%), Gaps = 2/176 (1%)
Strand = Plus / Minus
Query: 107 atgtctatgcacttggagtgatcctaatggaattgttaacgagaaaaagcgcaggtgaca 166
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 618 atgtctatgcacttggactgatcctaatggaattgttaacgagaaaaagcgcaggtgaca 559
Query: 167 taatatcagggcaatcaggtgctgttgatctcacagattgggttaggctgtgtgaaagag 226
|||||||||||| ||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 558 taatatcagggccatcaggttctgttgatctcacagattgggttaggctgtgtgaaagag 499
Query: 227 aagggagggtaatggattgtatagacaga-gacattgca-ggtggtgaagaatcct 280
||||||||||||||||||||||||||||| ||| ||||| ||||||||||||||||
Sbjct: 498 aagggagggtaatggattgtatagacagacgaccttgcacggtggtgaagaatcct 443