Miyakogusa Predicted Gene

Lj1g3v1206710.1
Show Alignment:  

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj1g3v1206710.1 gene.g30984.t1.1
         (402 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|TC77136 homologue to UniRef100_A7Q7B7 Cluster: Chromoso...   513   e-145

>gnl|LJGI|TC77136 homologue to UniRef100_A7Q7B7 Cluster: Chromosome chr18
           scaffold_59, whole genome shotgun sequence; n=1; Vitis
           vinifera|Rep: Chromosome chr18 scaffold_59, whole genome
           shotgun sequence - Vitis vinifera (Grape), partial (9%)
          Length = 599

 Score =  513 bits (259), Expect = e-145
 Identities = 262/263 (99%)
 Strand = Plus / Plus

                                                                       
Query: 101 ttgcattgcatatcgacacccttgcgaagacgacagtgaacggcgacggtggcgatgata 160
           ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 98  ttgcattgcatatcgacacccttgcgatgacgacagtgaacggcgacggtggcgatgata 157

                                                                       
Query: 161 cctcggcagtgcttagaagaagagcggcaaccgctacaaactcatcggaggatagtgttc 220
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 158 cctcggcagtgcttagaagaagagcggcaaccgctacaaactcatcggaggatagtgttc 217

                                                                       
Query: 221 ttccctctcctctgaacctggtcgccctcacgcagtattgctctgccgtggaatcgtcgt 280
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 218 ttccctctcctctgaacctggtcgccctcacgcagtattgctctgccgtggaatcgtcgt 277

                                                                       
Query: 281 atctaaagcatggcagcgaacactcgcagcgcaaggtgcgattcagcttcaaggttttct 340
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 278 atctaaagcatggcagcgaacactcgcagcgcaaggtgcgattcagcttcaaggttttct 337

                                  
Query: 341 cccctcaaatcaacgttaccacg 363
           |||||||||||||||||||||||
Sbjct: 338 cccctcaaatcaacgttaccacg 360



 Score =  123 bits (62), Expect = 9e-28
 Identities = 68/70 (97%)
 Strand = Plus / Plus

                                                                       
Query: 31  cctctgaacctggtcgccctcacgcaatattgctctgtcgtggaatcgtcgtatctaaag 90
           |||||||||||||||||||||||||| |||||||||| ||||||||||||||||||||||
Sbjct: 226 cctctgaacctggtcgccctcacgcagtattgctctgccgtggaatcgtcgtatctaaag 285

                     
Query: 91  catggcagcg 100
           ||||||||||
Sbjct: 286 catggcagcg 295



 Score = 54.0 bits (27), Expect = 7e-07
 Identities = 30/31 (96%)
 Strand = Plus / Plus

                                          
Query: 1   atgatacctcggcagtgcctagaagaagagc 31
           |||||||||||||||||| ||||||||||||
Sbjct: 152 atgatacctcggcagtgcttagaagaagagc 182