Miyakogusa Predicted Gene
- Lj1g3v1182090.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj1g3v1182090.1 tr|Q56VR0|Q56VR0_LOTJA Superoxide dismutase
OS=Lotus japonicus GN=sodA PE=3 SV=1,99.19,0,SOD_MN,Manganese/iron
superoxide dismutase, binding site; seg,NULL; SUPEROXIDE DISMUTASE
[MN],NULL; ,CUFF.27026.1
(741 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC69295 UniRef100_Q56VR0 Cluster: Mn-superoxide dismuta... 1461 0.0
gnl|LJGI|GO006600 UniRef100_Q56VR0 Cluster: Mn-superoxide dismut... 1243 0.0
gnl|LJGI|AV422227 UniRef100_Q56VR0 Cluster: Mn-superoxide dismut... 109 2e-23
gnl|LJGI|BW595485 similar to UniRef100_Q56VR0 Cluster: Mn-supero... 88 9e-17
>gnl|LJGI|TC69295 UniRef100_Q56VR0 Cluster: Mn-superoxide dismutase; n=1; Lotus
japonicus|Rep: Mn-superoxide dismutase - Lotus
japonicus, complete
Length = 1214
Score = 1461 bits (737), Expect = 0.0
Identities = 740/741 (99%)
Strand = Plus / Plus
Query: 1 atggctgtgcgaaccctgttgagcagaaaaaccctagcctccgtgctcctccgcaatgac 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 74 atggctgtgcgaaccctgttgagcagaaaaaccctagcctccgtgctcctccgcaatgac 133
Query: 61 atcggagcgggaggcatggcggcggcagcagcagcaggagctgctcaaactcattcccgt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 134 atcggagcgggaggcatggcggcggcagcagcagcaggagctgctcaaactcattcccgt 193
Query: 121 ggcatccatgccctcacgcttcccgatctcggttacgattatggcgccttggagcctgtc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 194 ggcatccatgccctcacgcttcccgatctcggttacgattatggcgccttggagcctgtc 253
Query: 181 atcagcggcgaaatcatgcaaatccatcaccagaagcatcaccagacttacatcaccaac 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 254 atcagcggcgaaatcatgcaaatccatcaccagaagcatcaccagacttacatcaccaac 313
Query: 241 tacaacaaggctctcgagcagcttcaagatgccatcgccaagtccgattcctcagccgtc 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 314 tacaacaaggctctcgagcagcttcaagatgccatcgccaagtccgattcctcagccgtc 373
Query: 301 gttaagctccagagtgcaatcaaattcaatggcggaggtcatgtcaaccattccattttc 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 374 gttaagctccagagtgcaatcaaattcaatggcggaggtcatgtcaaccattccattttc 433
Query: 361 tggaaaaatctagctccccctcgtgaaggaggtggagaatcaccccatggctccttggga 420
|||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 434 tggaaaaatctagctccccctcgtgaaggaggtggagaatcaccccatggctccatggga 493
Query: 421 tgggccattgacacacattttggttcttttgaagcattgataaaaaaggtcaacgcagaa 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 494 tgggccattgacacacattttggttcttttgaagcattgataaaaaaggtcaacgcagaa 553
Query: 481 ggtgcggcactacaggggtctggatgggtctggcttggtctggacaaagagttcaacaag 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 554 ggtgcggcactacaggggtctggatgggtctggcttggtctggacaaagagttcaacaag 613
Query: 541 cttgttgttgaaaccaccgcaaaccaggatccactggttactaagggatcaagcttggtt 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 614 cttgttgttgaaaccaccgcaaaccaggatccactggttactaagggatcaagcttggtt 673
Query: 601 ccattgtttggtatagatgtttgggaacatgcatactacttacagtacaagaatgttaga 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 674 ccattgtttggtatagatgtttgggaacatgcatactacttacagtacaagaatgttaga 733
Query: 661 ccagactatttgaagaacatttggaaagttatcaactggaaatatgtcagtgaagtgtac 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 734 ccagactatttgaagaacatttggaaagttatcaactggaaatatgtcagtgaagtgtac 793
Query: 721 gagaaagagagttctgcttga 741
|||||||||||||||||||||
Sbjct: 794 gagaaagagagttctgcttga 814
>gnl|LJGI|GO006600 UniRef100_Q56VR0 Cluster: Mn-superoxide dismutase; n=1; Lotus
japonicus|Rep: Mn-superoxide dismutase - Lotus
japonicus, partial (85%)
Length = 727
Score = 1243 bits (627), Expect = 0.0
Identities = 633/635 (99%)
Strand = Plus / Plus
Query: 107 aaactcattcccgtggcatccatgccctcacgcttcccgatctcggttacgattatggcg 166
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 64 aaactcattcccgtggcatccatgccctcacgcttcccgatctcggttacgattatggcg 123
Query: 167 ccttggagcctgtcatcagcggcgaaatcatgcaaatccatcaccagaagcatcaccaga 226
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 124 ccttggagcctgtcatcagcggcgaaatcatgcaaatccatcaccagaagcatcaccaga 183
Query: 227 cttacatcaccaactacaacaaggctctcgagcagcttcaagatgccatcgccaagtccg 286
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 184 cttacatcaccaactacaacaaggctctcgagcagcttcaagatgccatcgccaagtccg 243
Query: 287 attcctcagccgtcgttaagctccagagtgcaatcaaattcaatggcggaggtcatgtca 346
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 244 attcctcagccgtcgttaagctccagagtgcaatcaaattcaatggcggaggtcatgtca 303
Query: 347 accattccattttctggaaaaatctagctccccctcgtgaaggaggtggagaatcacccc 406
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 304 accattccattttctggaaaaatctagctccccctcgtgaaggaggtggagaatcacccc 363
Query: 407 atggctccttgggatgggccattgacacacattttggttcttttgaagcattgataaaaa 466
|||||||| ||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 364 atggctccatgggatgggccattgacacgcattttggttcttttgaagcattgataaaaa 423
Query: 467 aggtcaacgcagaaggtgcggcactacaggggtctggatgggtctggcttggtctggaca 526
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 424 aggtcaacgcagaaggtgcggcactacaggggtctggatgggtctggcttggtctggaca 483
Query: 527 aagagttcaacaagcttgttgttgaaaccaccgcaaaccaggatccactggttactaagg 586
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 484 aagagttcaacaagcttgttgttgaaaccaccgcaaaccaggatccactggttactaagg 543
Query: 587 gatcaagcttggttccattgtttggtatagatgtttgggaacatgcatactacttacagt 646
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 544 gatcaagcttggttccattgtttggtatagatgtttgggaacatgcatactacttacagt 603
Query: 647 acaagaatgttagaccagactatttgaagaacatttggaaagttatcaactggaaatatg 706
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 604 acaagaatgttagaccagactatttgaagaacatttggaaagttatcaactggaaatatg 663
Query: 707 tcagtgaagtgtacgagaaagagagttctgcttga 741
|||||||||||||||||||||||||||||||||||
Sbjct: 664 tcagtgaagtgtacgagaaagagagttctgcttga 698
>gnl|LJGI|AV422227 UniRef100_Q56VR0 Cluster: Mn-superoxide dismutase; n=1; Lotus
japonicus|Rep: Mn-superoxide dismutase - Lotus
japonicus, partial (7%)
Length = 482
Score = 109 bits (55), Expect = 2e-23
Identities = 55/55 (100%)
Strand = Plus / Plus
Query: 18 gttgagcagaaaaaccctagcctccgtgctcctccgcaatgacatcggagcggga 72
|||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 428 gttgagcagaaaaaccctagcctccgtgctcctccgcaatgacatcggagcggga 482
>gnl|LJGI|BW595485 similar to UniRef100_Q56VR0 Cluster: Mn-superoxide dismutase; n=1;
Lotus japonicus|Rep: Mn-superoxide dismutase - Lotus
japonicus, partial (7%)
Length = 482
Score = 87.7 bits (44), Expect = 9e-17
Identities = 47/48 (97%)
Strand = Plus / Plus
Query: 405 ccatggctccttgggatgggccattgacacacattttggttcttttga 452
|||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 435 ccatggctccatgggatgggccattgacacacattttggttcttttga 482