Miyakogusa Predicted Gene
- Lj1g3v1180820.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj1g3v1180820.1 Non Chatacterized Hit- tr|I1JYB4|I1JYB4_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.25682
PE,68.4,0,seg,NULL; SUBFAMILY NOT NAMED,NULL;
UNCHARACTERIZED,Mini-chromosome maintenance complex-binding
prot,CUFF.26922.1
(1518 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|FS322663 weakly similar to UniRef100_A7Q3U1 Cluster: Ch... 823 0.0
gnl|LJGI|TC76704 similar to UniRef100_A7Q3U1 Cluster: Chromosome... 801 0.0
gnl|LJGI|TC66718 weakly similar to UniRef100_A7Q3U1 Cluster: Chr... 527 e-149
gnl|LJGI|AV407189 similar to UniRef100_A7Q3U1 Cluster: Chromosom... 430 e-119
gnl|LJGI|TC82162 similar to UniRef100_A7Q3U1 Cluster: Chromosome... 234 1e-60
>gnl|LJGI|FS322663 weakly similar to UniRef100_A7Q3U1 Cluster: Chromosome chr13
scaffold_48, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome chr13 scaffold_48, whole genome
shotgun sequence - Vitis vinifera (Grape), partial (15%)
Length = 731
Score = 823 bits (415), Expect = 0.0
Identities = 415/415 (100%)
Strand = Plus / Plus
Query: 1 atgtttgggaatgaatgttacattggcgcttacaaggatggttcggcgtggaggaccaac 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 317 atgtttgggaatgaatgttacattggcgcttacaaggatggttcggcgtggaggaccaac 376
Query: 61 aagtttatggatttttctccagttcctatggcttccccctcacctgatacgctaatctgg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 377 aagtttatggatttttctccagttcctatggcttccccctcacctgatacgctaatctgg 436
Query: 121 gaacgccgagtgcattactgtattccgattcccggactgaatccgtgggctgaagttggg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 437 gaacgccgagtgcattactgtattccgattcccggactgaatccgtgggctgaagttggg 496
Query: 181 aatgattctatggattggacatcggaacaaagagtaaagcggaggagaccagaggatgac 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 497 aatgattctatggattggacatcggaacaaagagtaaagcggaggagaccagaggatgac 556
Query: 241 tctcctgatatgcctgtctcttgtgacaatgatcagggttctcctagtactaaaaagatg 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 557 tctcctgatatgcctgtctcttgtgacaatgatcagggttctcctagtactaaaaagatg 616
Query: 301 agagaaggtgaagactcttcccttactactaaatctcagagagcttcacttgagattgct 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 617 agagaaggtgaagactcttcccttactactaaatctcagagagcttcacttgagattgct 676
Query: 361 gtgtctagtacaagtttaatgtctggtcttgatagtaactcacctgcctgtattg 415
|||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 677 gtgtctagtacaagtttaatgtctggtcttgatagtaactcacctgcctgtattg 731
>gnl|LJGI|TC76704 similar to UniRef100_A7Q3U1 Cluster: Chromosome chr13 scaffold_48,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr13 scaffold_48, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (20%)
Length = 688
Score = 801 bits (404), Expect = 0.0
Identities = 407/408 (99%)
Strand = Plus / Plus
Query: 1111 gactacaacttcatgtactgcacaatgcccatcgaaactgatgtacaagtgctagttttg 1170
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 gactacaacttcatgtactgcacaatgcccatcgaaactgatgtacaagtgctagttttg 60
Query: 1171 tcagaggggaaatcaaatatcttgccagctgatgtaattgtgcctttccagccttctgca 1230
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 tcagaggggaaatcaaatatcttgccagctgatgtaattgtgcctttccagccttctgca 120
Query: 1231 accaattgctctgaagctgtggccgcagaaactttggaagcttggaggtggtatttagct 1290
||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 acccattgctctgaagctgtggccgcagaaactttggaagcttggaggtggtatttagct 180
Query: 1291 actgttagacaacttccacactctattggatcagaagttcagaaggtagttgaaaatgat 1350
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 actgttagacaacttccacactctattggatcagaagttcagaaggtagttgaaaatgat 240
Query: 1351 tttgtagaagcaagacagacagataggagcttaactccccaagattttagcagattgtta 1410
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 tttgtagaagcaagacagacagataggagcttaactccccaagattttagcagattgtta 300
Query: 1411 acgatgggtcgcctcatgtccaaaagcttcggtgagaccagtctatcactggaacattgg 1470
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 acgatgggtcgcctcatgtccaaaagcttcggtgagaccagtctatcactggaacattgg 360
Query: 1471 caaatggtcaaggatctggagagactgcggagagagaggttaaagtga 1518
||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 caaatggtcaaggatctggagagactgcggagagagaggttaaagtga 408
>gnl|LJGI|TC66718 weakly similar to UniRef100_A7Q3U1 Cluster: Chromosome chr13
scaffold_48, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome chr13 scaffold_48, whole genome
shotgun sequence - Vitis vinifera (Grape), partial (15%)
Length = 681
Score = 527 bits (266), Expect = e-149
Identities = 266/266 (100%)
Strand = Plus / Plus
Query: 34 aaggatggttcggcgtggaggaccaacaagtttatggatttttctccagttcctatggct 93
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 416 aaggatggttcggcgtggaggaccaacaagtttatggatttttctccagttcctatggct 475
Query: 94 tccccctcacctgatacgctaatctgggaacgccgagtgcattactgtattccgattccc 153
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 476 tccccctcacctgatacgctaatctgggaacgccgagtgcattactgtattccgattccc 535
Query: 154 ggactgaatccgtgggctgaagttgggaatgattctatggattggacatcggaacaaaga 213
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 536 ggactgaatccgtgggctgaagttgggaatgattctatggattggacatcggaacaaaga 595
Query: 214 gtaaagcggaggagaccagaggatgactctcctgatatgcctgtctcttgtgacaatgat 273
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 596 gtaaagcggaggagaccagaggatgactctcctgatatgcctgtctcttgtgacaatgat 655
Query: 274 cagggttctcctagtactaaaaagat 299
||||||||||||||||||||||||||
Sbjct: 656 cagggttctcctagtactaaaaagat 681
Score = 73.8 bits (37), Expect = 3e-12
Identities = 37/37 (100%)
Strand = Plus / Plus
Query: 1 atgtttgggaatgaatgttacattggcgcttacaagg 37
|||||||||||||||||||||||||||||||||||||
Sbjct: 289 atgtttgggaatgaatgttacattggcgcttacaagg 325
>gnl|LJGI|AV407189 similar to UniRef100_A7Q3U1 Cluster: Chromosome chr13 scaffold_48,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr13 scaffold_48, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (6%)
Length = 217
Score = 430 bits (217), Expect = e-119
Identities = 217/217 (100%)
Strand = Plus / Plus
Query: 467 agtttgtgggcatccttactgatccagtgcttcatgaggacaatgaagatagtgaattgt 526
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 agtttgtgggcatccttactgatccagtgcttcatgaggacaatgaagatagtgaattgt 60
Query: 527 caaatagtgaattgtcaaatgaactttgtgcagaatttatgcatcctaaggtaccacgcc 586
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 caaatagtgaattgtcaaatgaactttgtgcagaatttatgcatcctaaggtaccacgcc 120
Query: 587 ttcattgtttaattcacagaaagcttgcagttcaggacttcattcagaataaccctattt 646
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 ttcattgtttaattcacagaaagcttgcagttcaggacttcattcagaataaccctattt 180
Query: 647 tagagcccaagcctgatctggtgaaaggcatccgaga 683
|||||||||||||||||||||||||||||||||||||
Sbjct: 181 tagagcccaagcctgatctggtgaaaggcatccgaga 217
>gnl|LJGI|TC82162 similar to UniRef100_A7Q3U1 Cluster: Chromosome chr13 scaffold_48,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr13 scaffold_48, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (10%)
Length = 506
Score = 234 bits (118), Expect = 1e-60
Identities = 118/118 (100%)
Strand = Plus / Plus
Query: 1401 cagattgttaacgatgggtcgcctcatgtccaaaagcttcggtgagaccagtctatcact 1460
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 160 cagattgttaacgatgggtcgcctcatgtccaaaagcttcggtgagaccagtctatcact 219
Query: 1461 ggaacattggcaaatggtcaaggatctggagagactgcggagagagaggttaaagtga 1518
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 220 ggaacattggcaaatggtcaaggatctggagagactgcggagagagaggttaaagtga 277
Score = 139 bits (70), Expect = 6e-32
Identities = 70/70 (100%)
Strand = Plus / Plus
Query: 1334 aggtagttgaaaatgattttgtagaagcaagacagacagataggagcttaactccccaag 1393
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6 aggtagttgaaaatgattttgtagaagcaagacagacagataggagcttaactccccaag 65
Query: 1394 attttagcag 1403
||||||||||
Sbjct: 66 attttagcag 75