Miyakogusa Predicted Gene

Lj1g3v1169710.1

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj1g3v1169710.1 Non Chatacterized Hit- tr|I3SIC0|I3SIC0_LOTJA
Uncharacterized protein OS=Lotus japonicus PE=2
SV=1,100,0,RING/U-box,NULL; zf-RING_2,Zinc finger, RING-type;
ZF_RING_2,Zinc finger, RING-type; no description,,CUFF.26896.1
         (621 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|AV770943 similar to UniRef100_A7QFN6 Cluster: Chromosom...   474   e-133
gnl|LJGI|GO025569 weakly similar to UniRef100_A7QBB7 Cluster: Ch...   375   e-103

>gnl|LJGI|AV770943 similar to UniRef100_A7QFN6 Cluster: Chromosome chr8 scaffold_88,
           whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
           Chromosome chr8 scaffold_88, whole genome shotgun
           sequence - Vitis vinifera (Grape), partial (22%)
          Length = 481

 Score =  474 bits (239), Expect = e-133
 Identities = 251/255 (98%)
 Strand = Plus / Minus

                                                                       
Query: 367 gtggatggagagaaagttagagttctgccaaaatgtaaccatggattccatgtgaagtgc 426
           ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 481 gtggatggagagaaagttagagttctgcctaaatgtaaccatggattccatgtgaagtgc 422

                                                                       
Query: 427 atagataaatggctgctctcacactcttcttgtcctaactgcagacagtcattgcttgac 486
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 atagataaatggctgctctcacactcttcttgtcctaactgcagacagtcattgcttgac 362

                                                                       
Query: 487 cctccatcaatgtctgaagctgcaactgtcgcagtagctgtagttgcagatgctggaacc 546
           |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 cctccatccatgtctgaagctgcaactgtcgcagtagctgtagttgcagatgctggaacc 302

                                                                       
Query: 547 acgcgccatgtagagaattccttgggaggacatgaacctgggactttagctatagctgtg 606
            |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 301 gcgcgccatgtagagaattccttgggaggacatgaacctgggactgtagctatagctgtg 242

                          
Query: 607 gacgaggttggctaa 621
           |||||||||||||||
Sbjct: 241 gacgaggttggctaa 227


>gnl|LJGI|GO025569 weakly similar to UniRef100_A7QBB7 Cluster: Chromosome chr4
           scaffold_73, whole genome shotgun sequence; n=1; Vitis
           vinifera|Rep: Chromosome chr4 scaffold_73, whole genome
           shotgun sequence - Vitis vinifera (Grape), partial (9%)
          Length = 556

 Score =  375 bits (189), Expect = e-103
 Identities = 189/189 (100%)
 Strand = Plus / Plus

                                                                       
Query: 1   atggatcttcatcaccatctacaccgccgcctgttggttcaccgtgtaaattcaactgat 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 368 atggatcttcatcaccatctacaccgccgcctgttggttcaccgtgtaaattcaactgat 427

                                                                       
Query: 61  ccagggtcgaaggaatctctcaccggtggctcaaattttgacaccaacatgctgtttatc 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 428 ccagggtcgaaggaatctctcaccggtggctcaaattttgacaccaacatgctgtttatc 487

                                                                       
Query: 121 ttggcagctttgctttgtgcactgatattggctctgggactcaactccattgtgcgctgt 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 488 ttggcagctttgctttgtgcactgatattggctctgggactcaactccattgtgcgctgt 547

                    
Query: 181 gcttgtttg 189
           |||||||||
Sbjct: 548 gcttgtttg 556