Miyakogusa Predicted Gene

Lj1g3v1147550.1

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj1g3v1147550.1 Non Chatacterized Hit- tr|K3ZQA4|K3ZQA4_SETIT
Uncharacterized protein OS=Setaria italica
GN=Si028784,31.91,3e-18,LRR,Leucine-rich repeat; LRR_8,NULL;
LRR_1,Leucine-rich repeat; LRRNT_2,Leucine-rich
repeat-containi,CUFF.26890.1
         (1495 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|BP062816 similar to UniRef100_A7Q3X5 Cluster: Chromosom...   452   e-126
gnl|LJGI|BP049467 similar to UniRef100_A8WAA8 Cluster: Odorant r...    62   1e-08
gnl|LJGI|GO036933 UniRef100_A0Z376 Cluster: Flagellar M-ring pro...    60   4e-08

>gnl|LJGI|BP062816 similar to UniRef100_A7Q3X5 Cluster: Chromosome chr13 scaffold_48,
           whole genome shotgun sequence; n=2; Vitis vinifera|Rep:
           Chromosome chr13 scaffold_48, whole genome shotgun
           sequence - Vitis vinifera (Grape), partial (5%)
          Length = 482

 Score =  452 bits (228), Expect = e-126
 Identities = 248/255 (97%), Gaps = 6/255 (2%)
 Strand = Plus / Plus

                                                                       
Query: 1   atgcgagctttattcaacatgagagctcttcttttgtgcttgttgccgctgattctgacg 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 228 atgcgagctttattcaacatgagagctcttcttttgtgcttgttgccgctgattctgacg 287

                                                                       
Query: 61  gcggcggcg------gtggcggcggtagctgtgagcccgtcactgaacgacgacgtattg 114
           |||||||||      |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 288 gcggcggcggtggcggtggcggcggtagctgtgagcccgtcactgaacgacgacgtattg 347

                                                                       
Query: 115 gggctgattgtgttcaaagctgacatacgagatccgaaggggaagctggtgtcatggaac 174
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 348 gggctgattgtgttcaaagctgacatacgagatccgaaggggaagctggtgtcatggaac 407

                                                                       
Query: 175 gaggatgatgaaagtgcttgtggcggtggttgggttggggtgaaatgtaaccctagatcc 234
           ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 408 gaggatgatgagagtgcttgtggcggtggttgggttggggtgaaatgtaaccctagatcc 467

                          
Query: 235 aacagggtggtggag 249
           |||||||||||||||
Sbjct: 468 aacagggtggtggag 482


>gnl|LJGI|BP049467 similar to UniRef100_A8WAA8 Cluster: Odorant receptor; n=1;
           Rhagoletis suavis|Rep: Odorant receptor - Rhagoletis
           suavis, partial (3%)
          Length = 556

 Score = 61.9 bits (31), Expect = 1e-08
 Identities = 34/35 (97%)
 Strand = Plus / Minus

                                              
Query: 847 gctttctcaggagaggttcctgagtggattggaga 881
           |||||||| ||||||||||||||||||||||||||
Sbjct: 147 gctttctcgggagaggttcctgagtggattggaga 113


>gnl|LJGI|GO036933 UniRef100_A0Z376 Cluster: Flagellar M-ring protein; n=1; marine
           gamma proteobacterium HTCC2080|Rep: Flagellar M-ring,
           partial (4%)
          Length = 660

 Score = 60.0 bits (30), Expect = 4e-08
 Identities = 30/30 (100%)
 Strand = Plus / Minus

                                         
Query: 857 gagaggttcctgagtggattggagagatga 886
           ||||||||||||||||||||||||||||||
Sbjct: 212 gagaggttcctgagtggattggagagatga 183