Miyakogusa Predicted Gene

Lj1g3v1135200.2

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj1g3v1135200.2 Non Chatacterized Hit- tr|I1L3Y9|I1L3Y9_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.5980 PE=,90,0,seg,NULL;
no description,NULL; cAMP-binding domain-like,Cyclic
nucleotide-binding-like; CYCLIC NUCLE,CUFF.26876.2
         (441 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|BP080087 homologue to UniRef100_A7QJZ5 Cluster: Chromos...   188   2e-47
gnl|LJGI|BP052112 similar to UniRef100_A9CRE4 Cluster: Cyclic nu...   113   9e-25
gnl|LJGI|DC600059                                                      96   2e-19
gnl|LJGI|TC78200 similar to UniRef100_A9CRE4 Cluster: Cyclic nuc...    56   2e-07
gnl|LJGI|TC71454 similar to UniRef100_A7PPK3 Cluster: Chromosome...    52   3e-06

>gnl|LJGI|BP080087 homologue to UniRef100_A7QJZ5 Cluster: Chromosome undetermined
           scaffold_109, whole genome shotgun sequence; n=1; Vitis
           vinifera|Rep: Chromosome undetermined scaffold_109,
           whole genome shotgun sequence - Vitis vinifera (Grape),
           partial (5%)
          Length = 382

 Score =  188 bits (95), Expect = 2e-47
 Identities = 98/99 (98%)
 Strand = Plus / Minus

                                                                       
Query: 250 aggagagtaagacaggctgaacggtataattgggctgcaacaaggtgggtgaatgaagaa 309
           ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 331 aggagagtaagacaggctgaacggtataattgggctgcaacaaggggggtgaatgaagaa 272

                                                  
Query: 310 atggttatggagaatctgccagaagatctgcagagagac 348
           |||||||||||||||||||||||||||||||||||||||
Sbjct: 271 atggttatggagaatctgccagaagatctgcagagagac 233


>gnl|LJGI|BP052112 similar to UniRef100_A9CRE4 Cluster: Cyclic nucleotide gated
           channel; n=1; Malus x domestica|Rep: Cyclic nucleotide
           gated channel - Malus domestica (Apple) (Malus
           sylvestris), partial (21%)
          Length = 553

 Score =  113 bits (57), Expect = 9e-25
 Identities = 57/57 (100%)
 Strand = Plus / Minus

                                                                    
Query: 385 atggaactagaatgccattatctgaaggggacgcttgtggtgaagaacttatgacat 441
           |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 479 atggaactagaatgccattatctgaaggggacgcttgtggtgaagaacttatgacat 423


>gnl|LJGI|DC600059 
          Length = 572

 Score = 95.6 bits (48), Expect = 2e-19
 Identities = 48/48 (100%)
 Strand = Plus / Plus

                                                           
Query: 1   atggaaaactatcttaaccttatgcagcaaatcagtactatagctggt 48
           ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 525 atggaaaactatcttaaccttatgcagcaaatcagtactatagctggt 572


>gnl|LJGI|TC78200 similar to UniRef100_A9CRE4 Cluster: Cyclic nucleotide gated
           channel; n=1; Malus x domestica|Rep: Cyclic nucleotide
           gated channel - Malus domestica (Apple) (Malus
           sylvestris), partial (24%)
          Length = 1320

 Score = 56.0 bits (28), Expect = 2e-07
 Identities = 34/36 (94%)
 Strand = Plus / Plus

                                               
Query: 399 ccattatctgaaggggacgcttgtggtgaagaactt 434
           |||||||| |||||||| ||||||||||||||||||
Sbjct: 140 ccattatcggaaggggatgcttgtggtgaagaactt 175


>gnl|LJGI|TC71454 similar to UniRef100_A7PPK3 Cluster: Chromosome chr8 scaffold_23,
          whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
          Chromosome chr8 scaffold_23, whole genome shotgun
          sequence - Vitis vinifera (Grape), partial (8%)
          Length = 580

 Score = 52.0 bits (26), Expect = 3e-06
 Identities = 26/26 (100%)
 Strand = Plus / Minus

                                    
Query: 1  atggaaaactatcttaaccttatgca 26
          ||||||||||||||||||||||||||
Sbjct: 26 atggaaaactatcttaaccttatgca 1