Miyakogusa Predicted Gene
- Lj1g3v1135200.2
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj1g3v1135200.2 Non Chatacterized Hit- tr|I1L3Y9|I1L3Y9_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.5980 PE=,90,0,seg,NULL;
no description,NULL; cAMP-binding domain-like,Cyclic
nucleotide-binding-like; CYCLIC NUCLE,CUFF.26876.2
(441 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|BP080087 homologue to UniRef100_A7QJZ5 Cluster: Chromos... 188 2e-47
gnl|LJGI|BP052112 similar to UniRef100_A9CRE4 Cluster: Cyclic nu... 113 9e-25
gnl|LJGI|DC600059 96 2e-19
gnl|LJGI|TC78200 similar to UniRef100_A9CRE4 Cluster: Cyclic nuc... 56 2e-07
gnl|LJGI|TC71454 similar to UniRef100_A7PPK3 Cluster: Chromosome... 52 3e-06
>gnl|LJGI|BP080087 homologue to UniRef100_A7QJZ5 Cluster: Chromosome undetermined
scaffold_109, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome undetermined scaffold_109,
whole genome shotgun sequence - Vitis vinifera (Grape),
partial (5%)
Length = 382
Score = 188 bits (95), Expect = 2e-47
Identities = 98/99 (98%)
Strand = Plus / Minus
Query: 250 aggagagtaagacaggctgaacggtataattgggctgcaacaaggtgggtgaatgaagaa 309
||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 331 aggagagtaagacaggctgaacggtataattgggctgcaacaaggggggtgaatgaagaa 272
Query: 310 atggttatggagaatctgccagaagatctgcagagagac 348
|||||||||||||||||||||||||||||||||||||||
Sbjct: 271 atggttatggagaatctgccagaagatctgcagagagac 233
>gnl|LJGI|BP052112 similar to UniRef100_A9CRE4 Cluster: Cyclic nucleotide gated
channel; n=1; Malus x domestica|Rep: Cyclic nucleotide
gated channel - Malus domestica (Apple) (Malus
sylvestris), partial (21%)
Length = 553
Score = 113 bits (57), Expect = 9e-25
Identities = 57/57 (100%)
Strand = Plus / Minus
Query: 385 atggaactagaatgccattatctgaaggggacgcttgtggtgaagaacttatgacat 441
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 479 atggaactagaatgccattatctgaaggggacgcttgtggtgaagaacttatgacat 423
>gnl|LJGI|DC600059
Length = 572
Score = 95.6 bits (48), Expect = 2e-19
Identities = 48/48 (100%)
Strand = Plus / Plus
Query: 1 atggaaaactatcttaaccttatgcagcaaatcagtactatagctggt 48
||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 525 atggaaaactatcttaaccttatgcagcaaatcagtactatagctggt 572
>gnl|LJGI|TC78200 similar to UniRef100_A9CRE4 Cluster: Cyclic nucleotide gated
channel; n=1; Malus x domestica|Rep: Cyclic nucleotide
gated channel - Malus domestica (Apple) (Malus
sylvestris), partial (24%)
Length = 1320
Score = 56.0 bits (28), Expect = 2e-07
Identities = 34/36 (94%)
Strand = Plus / Plus
Query: 399 ccattatctgaaggggacgcttgtggtgaagaactt 434
|||||||| |||||||| ||||||||||||||||||
Sbjct: 140 ccattatcggaaggggatgcttgtggtgaagaactt 175
>gnl|LJGI|TC71454 similar to UniRef100_A7PPK3 Cluster: Chromosome chr8 scaffold_23,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr8 scaffold_23, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (8%)
Length = 580
Score = 52.0 bits (26), Expect = 3e-06
Identities = 26/26 (100%)
Strand = Plus / Minus
Query: 1 atggaaaactatcttaaccttatgca 26
||||||||||||||||||||||||||
Sbjct: 26 atggaaaactatcttaaccttatgca 1