Miyakogusa Predicted Gene
- Lj1g3v1134040.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj1g3v1134040.1 Non Chatacterized Hit- tr|D8QRJ9|D8QRJ9_SELML
Putative uncharacterized protein OS=Selaginella
moelle,41.56,0.0000000001,no description,Transcription factor IIS,
N-terminal; no description,Transcription elongation factor
,CUFF.27141.1
(1110 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC73295 weakly similar to UniRef100_A7QFP8 Cluster: Chr... 1140 0.0
gnl|LJGI|GO027985 similar to UniRef100_A7QFP8 Cluster: Chromosom... 581 e-165
>gnl|LJGI|TC73295 weakly similar to UniRef100_A7QFP8 Cluster: Chromosome chr8
scaffold_88, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome chr8 scaffold_88, whole genome
shotgun sequence - Vitis vinifera (Grape), partial (21%)
Length = 668
Score = 1140 bits (575), Expect = 0.0
Identities = 575/575 (100%)
Strand = Plus / Minus
Query: 1 atggagaaggaattggtggaattgtatgaggccgcgaagaaggcggcggatgcgtccagt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 575 atggagaaggaattggtggaattgtatgaggccgcgaagaaggcggcggatgcgtccagt 516
Query: 61 tcttccgatagcgaacatgaagaaacccgatgcattgatgcgcttgaacagctcaagaaa 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 515 tcttccgatagcgaacatgaagaaacccgatgcattgatgcgcttgaacagctcaagaaa 456
Query: 121 tttcccgtcaattacaagattcttgttaacacccaggtgggcaaacatcttaaagttctt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 455 tttcccgtcaattacaagattcttgttaacacccaggtgggcaaacatcttaaagttctt 396
Query: 181 actaagcatcccaagccgaaaattaaggcttttgctgttgaactaattgagatatggaaa 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 395 actaagcatcccaagccgaaaattaaggcttttgctgttgaactaattgagatatggaaa 336
Query: 241 ggcataattatcaaggaaacaagcaaaaataagaacgggggctctgataataaggttgag 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 335 ggcataattatcaaggaaacaagcaaaaataagaacgggggctctgataataaggttgag 276
Query: 301 tcagcgaatggggacagagctaaagctgggaaaatgcagaagagtccctcggtgaaggtt 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 275 tcagcgaatggggacagagctaaagctgggaaaatgcagaagagtccctcggtgaaggtt 216
Query: 361 gagaaaggtgaaactgtcaaagttgagaaaattgataggaatggtacaccaaggtcaagc 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 215 gagaaaggtgaaactgtcaaagttgagaaaattgataggaatggtacaccaaggtcaagc 156
Query: 421 tcagaaaatacaaacaaggcacgaaatgtggatgtcaaaattgagaaaactgaacgtgct 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 155 tcagaaaatacaaacaaggcacgaaatgtggatgtcaaaattgagaaaactgaacgtgct 96
Query: 481 gctagtgtcaaggtggaaaagatagccaaggaagaaaagccagtttctgtggtgaagaaa 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 95 gctagtgtcaaggtggaaaagatagccaaggaagaaaagccagtttctgtggtgaagaaa 36
Query: 541 acaccatccagctctgccgctcctccgaagctaac 575
|||||||||||||||||||||||||||||||||||
Sbjct: 35 acaccatccagctctgccgctcctccgaagctaac 1
>gnl|LJGI|GO027985 similar to UniRef100_A7QFP8 Cluster: Chromosome chr8 scaffold_88,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr8 scaffold_88, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (27%)
Length = 325
Score = 581 bits (293), Expect = e-165
Identities = 296/297 (99%)
Strand = Plus / Minus
Query: 814 ccagattttcgaagaaaagttctactcggtgttattgagccggagcggctggtcaacatg 873
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 ccagattttcgaagaaaagttctactcggtgttattgagccggagcggctggtcaacatg 266
Query: 874 agcacggcagaaatggccagtgaacagaggaagcaggagattgagaaaatccaagagaaa 933
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 agcacggcagaaatggccagtgaacagaggaagcaggagattgagaaaatccaagagaaa 206
Query: 934 gctttgtttgaatgtgagcgtggagctccaccaaaagctacaactgatcaattcaagtgt 993
||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 205 gctttgtttgaatgtgagcgtggagctccaccaaaagttacaactgatcaattcaagtgt 146
Query: 994 ggtcggtgcgggcaaaggaagtgcacctattaccaaatgcagactcgcagtgctgatgaa 1053
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 145 ggtcggtgcgggcaaaggaagtgcacctattaccaaatgcagactcgcagtgctgatgaa 86
Query: 1054 cctatgacaacctatgtcacttgtactgtctgcaataaccgttggaagttctgttag 1110
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 85 cctatgacaacctatgtcacttgtactgtctgcaataaccgttggaagttctgttag 29