Miyakogusa Predicted Gene

Lj1g3v1134010.1
Show Alignment:  

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj1g3v1134010.1 Non Chatacterized Hit- tr|G8A1B0|G8A1B0_MEDTR
Putative uncharacterized protein OS=Medicago
truncatul,35.12,2e-18,coiled-coil,NULL; seg,NULL,CUFF.27137.1
         (1854 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|FS338120 weakly similar to UniRef100_A7QNA6 Cluster: Ch...    62   1e-08

>gnl|LJGI|FS338120 weakly similar to UniRef100_A7QNA6 Cluster: Chromosome chr2
           scaffold_132, whole genome shotgun sequence; n=1; Vitis
           vinifera|Rep: Chromosome chr2 scaffold_132, whole genome
           shotgun sequence - Vitis vinifera (Grape), partial (4%)
          Length = 632

 Score = 61.9 bits (31), Expect = 1e-08
 Identities = 73/87 (83%)
 Strand = Plus / Plus

                                                                       
Query: 40  tgtcctaaatgcaaccaacttcttccagagcctccaggatatgaactttacaagtgtggt 99
           ||||||||||||   ||||||||||| ||| ||||||  |||||  | ||||||||||| 
Sbjct: 487 tgtcctaaatgccggcaacttcttccggagtctccagattatgatgtgtacaagtgtgga 546

                                      
Query: 100 ggatgtggcacactccttaaagctaag 126
           |||||||||||  ||||| ||||||||
Sbjct: 547 ggatgtggcacgatccttcaagctaag 573