Miyakogusa Predicted Gene
- Lj1g3v1112870.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj1g3v1112870.1 Non Chatacterized Hit- tr|I1KB53|I1KB53_SOYBN
Uncharacterized protein OS=Glycine max PE=4 SV=1,86.55,0,WD40
repeat-like,WD40-repeat-containing domain; WD40 repeats,WD40 repeat;
WIPI-3,4,NULL; WD-REPEAT P,CUFF.26846.1
(1269 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC66820 similar to UniRef100_A7Q3D3 Cluster: Chromosome... 1275 0.0
gnl|LJGI|TC75565 similar to UniRef100_A7Q3D3 Cluster: Chromosome... 1100 0.0
>gnl|LJGI|TC66820 similar to UniRef100_A7Q3D3 Cluster: Chromosome chr13 scaffold_48,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr13 scaffold_48, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (50%)
Length = 867
Score = 1275 bits (643), Expect = 0.0
Identities = 646/647 (99%)
Strand = Plus / Plus
Query: 623 ggcaggtccgagttgaacactttggactgaatatgaaaaaattcatcaatgctcatgatt 682
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 ggcaggtccgagttgaacactttggactgaatatgaaaaaattcatcaatgctcatgatt 60
Query: 683 cccaacttgcatgcttcactttaacaatggatgggctccttcttgcaactgctagtttaa 742
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 cccaacttgcatgcttcactttaacaatggatgggctccttcttgcaactgctagtttaa 120
Query: 743 agggcactttgattagaatcttcaatacaatggatgggtcacttttacaagaagtaagaa 802
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 agggcactttgattagaatcttcaatacaatggatgggtcacttttacaagaagtaagaa 180
Query: 803 gaggggtggatagagctgaaatcaacagtatagcgctgtctccagatgtccaatggttgg 862
||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 gaggggtggatagggctgaaatcaacagtatagcgctgtctccagatgtccaatggttgg 240
Query: 863 cagcttcaagtgacaaaggaactgttcatattttcagcttgagagtgagagtgtctgggg 922
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 cagcttcaagtgacaaaggaactgttcatattttcagcttgagagtgagagtgtctgggg 300
Query: 923 aggatagtttaacacatccaaacgctgctcaaggccctgcactgtttcatcagaattctt 982
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 aggatagtttaacacatccaaacgctgctcaaggccctgcactgtttcatcagaattctt 360
Query: 983 caacttcgttagatcccttgatttctccaaatactggtgccaaccccaattcatcattat 1042
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 caacttcgttagatcccttgatttctccaaatactggtgccaaccccaattcatcattat 420
Query: 1043 ctttcatgagagggattttaccgaaatactttagctcagaatggtcattttcacagttcc 1102
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 ctttcatgagagggattttaccgaaatactttagctcagaatggtcattttcacagttcc 480
Query: 1103 acttgcctgaaaaaactcatttcattgtggcattcggatctcagaactctgtcataattg 1162
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 481 acttgcctgaaaaaactcatttcattgtggcattcggatctcagaactctgtcataattg 540
Query: 1163 ttggcatggatgggagtttttacagatgcagctttgatacaatacatgggggagagatgt 1222
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 541 ttggcatggatgggagtttttacagatgcagctttgatacaatacatgggggagagatgt 600
Query: 1223 tgcagcaggaatatgttcgtttccttagatgtgaaactaggatttga 1269
|||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 601 tgcagcaggaatatgttcgtttccttagatgtgaaactaggatttga 647
>gnl|LJGI|TC75565 similar to UniRef100_A7Q3D3 Cluster: Chromosome chr13 scaffold_48,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr13 scaffold_48, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (32%)
Length = 755
Score = 1100 bits (555), Expect = 0.0
Identities = 555/555 (100%)
Strand = Plus / Plus
Query: 1 atgcagcaaatgatggcaagtaccccctcgtccaaagtgagttcgcctgattcaacatct 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 atgcagcaaatgatggcaagtaccccctcgtccaaagtgagttcgcctgattcaacatct 260
Query: 61 caaggaatattttctacttcaaggatcagaaacagtgaaacccccaatgttggggcttct 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 caaggaatattttctacttcaaggatcagaaacagtgaaacccccaatgttggggcttct 320
Query: 121 ccttcggttggccagctcaatgcagatatgaatggaaacgatgaaacagacttgctgtca 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 ccttcggttggccagctcaatgcagatatgaatggaaacgatgaaacagacttgctgtca 380
Query: 181 atatcatggaatcaggactatggttgctttgctgctggaacaagtcgtggttttcatata 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 atatcatggaatcaggactatggttgctttgctgctggaacaagtcgtggttttcatata 440
Query: 241 tataactgtgaacctttcaaagaaactttcagacgtgatttaaaaagtggcggctttaaa 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 tataactgtgaacctttcaaagaaactttcagacgtgatttaaaaagtggcggctttaaa 500
Query: 301 attgtcgagatgctgttccgctgcaatattctagcccttgttggtgctgtagctaattcc 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 attgtcgagatgctgttccgctgcaatattctagcccttgttggtgctgtagctaattcc 560
Query: 361 cattatcctcccaataaagttttgatttgggatgatcatcagagcaggtgcattggtgaa 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 cattatcctcccaataaagttttgatttgggatgatcatcagagcaggtgcattggtgaa 620
Query: 421 ttcacatttaagtctgaagttcgtggcgtaaaattaagacgtgatcgaattgtagttgtt 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 ttcacatttaagtctgaagttcgtggcgtaaaattaagacgtgatcgaattgtagttgtt 680
Query: 481 cttgagcacaagatatatgtttataacttcatggatttgcagcttcttcatcagattgag 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 681 cttgagcacaagatatatgtttataacttcatggatttgcagcttcttcatcagattgag 740
Query: 541 actctcgcgaatcct 555
|||||||||||||||
Sbjct: 741 actctcgcgaatcct 755