Miyakogusa Predicted Gene

Lj1g3v1091140.1

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj1g3v1091140.1 CUFF.26885.1
         (421 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|TC76765                                                       74   8e-13
gnl|LJGI|BP082028                                                      56   2e-07
gnl|LJGI|TC77672 similar to UniRef100_Q45307 Cluster: ORF4; TTG ...    56   2e-07

>gnl|LJGI|TC76765 
          Length = 504

 Score = 73.8 bits (37), Expect = 8e-13
 Identities = 58/65 (89%)
 Strand = Plus / Plus

                                                                      
Query: 2  tgatgataggagaagttggagttacaaaattgaagaaaaaccagatgagtcactcatgtg 61
          |||||||||  ||||  ||||||||||||||||||||||| |||||||| ||| ||||||
Sbjct: 1  tgatgatagttgaagaaggagttacaaaattgaagaaaaatcagatgagccacgcatgtg 60

               
Query: 62 cgcca 66
          |||||
Sbjct: 61 cgcca 65


>gnl|LJGI|BP082028 
          Length = 254

 Score = 56.0 bits (28), Expect = 2e-07
 Identities = 55/64 (85%)
 Strand = Plus / Minus

                                                                       
Query: 1   atgatgataggagaagttggagttacaaaattgaagaaaaaccagatgagtcactcatgt 60
           ||||||||||  ||||  ||||||||||||||||| ||||| || ||||| ||| |||||
Sbjct: 197 atgatgatagatgaagaaggagttacaaaattgaaaaaaaatcatatgagccacgcatgt 138

               
Query: 61  gcgc 64
           ||||
Sbjct: 137 gcgc 134


>gnl|LJGI|TC77672 similar to UniRef100_Q45307 Cluster: ORF4; TTG start codon; n=1;
          Bacillus licheniformis|Rep: ORF4; TTG start codon -
          Bacillus licheniformis, partial (8%)
          Length = 491

 Score = 56.0 bits (28), Expect = 2e-07
 Identities = 43/48 (89%)
 Strand = Plus / Plus

                                                          
Query: 19 ggagttacaaaattgaagaaaaaccagatgagtcactcatgtgcgcca 66
          ||||||||||||| |||| |||| |||||||| ||| |||||||||||
Sbjct: 25 ggagttacaaaatcgaagtaaaatcagatgagccacgcatgtgcgcca 72