Miyakogusa Predicted Gene
- Lj1g3v1090980.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj1g3v1090980.1 Non Chatacterized Hit- tr|K4D258|K4D258_SOLLC
Uncharacterized protein OS=Solanum lycopersicum
GN=Sol,55.28,3e-19,SUBFAMILY NOT NAMED,NULL; NASCENT POLYPEPTIDE
ASSOCIATED COMPLEX ALPHA SUBUNIT-RELATED,NULL; seg,NUL,CUFF.26791.1
(408 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC63506 similar to UniRef100_Q94JX9 Cluster: Nascent po... 355 1e-97
gnl|LJGI|TC63070 homologue to UniRef100_A7QEU5 Cluster: Chromoso... 264 4e-70
gnl|LJGI|FS343779 similar to UniRef100_Q75A01 Cluster: ADR122Cp;... 242 1e-63
gnl|LJGI|CB826779 similar to UniRef100_Q94JX9 Cluster: Nascent p... 210 5e-54
gnl|LJGI|TC63977 similar to UniRef100_Q2HUT9 Cluster: Nascent po... 52 3e-06
gnl|LJGI|TC57644 similar to UniRef100_Q2HUT9 Cluster: Nascent po... 52 3e-06
gnl|LJGI|TC57449 similar to UniRef100_Q2HUT9 Cluster: Nascent po... 52 3e-06
>gnl|LJGI|TC63506 similar to UniRef100_Q94JX9 Cluster: Nascent polypeptide-associated
complex subunit alpha-like protein 2; n=1; Arabidopsis
thaliana|Rep: Nascent polypeptide-associated complex
subunit alpha-like protein 2 - Arabidopsis thaliana
(Mouse-ear cress), partial (75%)
Length = 1083
Score = 355 bits (179), Expect = 1e-97
Identities = 193/200 (96%)
Strand = Plus / Plus
Query: 209 gtgctctaggtggttctgagggttcaaagcaaagcagaagtgagaagaagagtcgaaaag 268
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 307 gtgctctaggtggttctgagggttcaaagcaaagcagaagtgagaagaagagtcgaaaag 366
Query: 269 caatgttgaagcttggactgaaacctgtgactggcgtcagtagggtcacaatcaagagaa 328
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 367 caatgttgaagcttggactgaaacctgtgactggcgtcagtagggtcacaatcaagagaa 426
Query: 329 caaaaaatattcnnnnnnncatctcaaaacctgatgtcttcaagagtccaaattccgaga 388
|||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 427 caaaaaatattctttttttcatctcaaaacctgatgtcttcaagagtccaaattccgaga 486
Query: 389 cctacgtcatattcggggag 408
||||||||||||||||||||
Sbjct: 487 cctacgtcatattcggggag 506
Score = 242 bits (122), Expect = 1e-63
Identities = 122/122 (100%)
Strand = Plus / Plus
Query: 1 atggcaccaggtcccgttgttgacgcatcctccgaggccgaagccctcgaacaagttctc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 99 atggcaccaggtcccgttgttgacgcatcctccgaggccgaagccctcgaacaagttctc 158
Query: 61 tccgccgaagaaacaaccttaaagaagaagcctcagccgcaggaagatgatgctcccatt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 159 tccgccgaagaaacaaccttaaagaagaagcctcagccgcaggaagatgatgctcccatt 218
Query: 121 gt 122
||
Sbjct: 219 gt 220
>gnl|LJGI|TC63070 homologue to UniRef100_A7QEU5 Cluster: Chromosome chr16
scaffold_86, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome chr16 scaffold_86, whole genome
shotgun sequence - Vitis vinifera (Grape), partial (98%)
Length = 676
Score = 264 bits (133), Expect = 4e-70
Identities = 150/158 (94%)
Strand = Plus / Plus
Query: 251 agaagaagagtcgaaaagcaatgttgaagcttggactgaaacctgtgactggcgtcagta 310
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 154 agaagaagagtcgaaaagcaatgttgaagcttggactgaaacctgtgactggcgtcagta 213
Query: 311 gggtcacaatcaagagaacaaaaaatattcnnnnnnncatctcaaaacctgatgtcttca 370
|||||||||||||||||||||||||||||| ||||||||||||||||||| |||
Sbjct: 214 gggtcacaatcaagagaacaaaaaatattctttttttcatctcaaaacctgatgtcctca 273
Query: 371 agagtccaaattccgagacctacgtcatattcggggag 408
||||||||||||||||||||||||||||||||||||||
Sbjct: 274 agagtccaaattccgagacctacgtcatattcggggag 311
Score = 178 bits (90), Expect = 2e-44
Identities = 90/90 (100%)
Strand = Plus / Plus
Query: 1 atggcaccaggtcccgttgttgacgcatcctccgaggccgaagccctcgaacaagttctc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 72 atggcaccaggtcccgttgttgacgcatcctccgaggccgaagccctcgaacaagttctc 131
Query: 61 tccgccgaagaaacaaccttaaagaagaag 90
||||||||||||||||||||||||||||||
Sbjct: 132 tccgccgaagaaacaaccttaaagaagaag 161
>gnl|LJGI|FS343779 similar to UniRef100_Q75A01 Cluster: ADR122Cp; n=1; Eremothecium
gossypii|Rep: ADR122Cp - Ashbya gossypii (Yeast)
(Eremothecium gossypii), partial (7%)
Length = 633
Score = 242 bits (122), Expect = 1e-63
Identities = 122/122 (100%)
Strand = Plus / Plus
Query: 1 atggcaccaggtcccgttgttgacgcatcctccgaggccgaagccctcgaacaagttctc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 57 atggcaccaggtcccgttgttgacgcatcctccgaggccgaagccctcgaacaagttctc 116
Query: 61 tccgccgaagaaacaaccttaaagaagaagcctcagccgcaggaagatgatgctcccatt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 117 tccgccgaagaaacaaccttaaagaagaagcctcagccgcaggaagatgatgctcccatt 176
Query: 121 gt 122
||
Sbjct: 177 gt 178
>gnl|LJGI|CB826779 similar to UniRef100_Q94JX9 Cluster: Nascent polypeptide-associated
complex subunit alpha-like protein 2; n=1; Arabidopsis
thaliana|Rep: Nascent polypeptide-associated complex
subunit alpha-like protein 2 - Arabidopsis thaliana
(Mouse-ear cress), partial (35%)
Length = 445
Score = 210 bits (106), Expect = 5e-54
Identities = 162/183 (88%)
Strand = Plus / Plus
Query: 224 ctgagggttcaaagcaaagcagaagtgagaagaagagtcgaaaagcaatgttgaagcttg 283
|||||||||||||||| |||||||||||||| || || ||||||||||||||||||||||
Sbjct: 263 ctgagggttcaaagcagagcagaagtgagaaaaaaagccgaaaagcaatgttgaagcttg 322
Query: 284 gactgaaacctgtgactggcgtcagtagggtcacaatcaagagaacaaaaaatattcnnn 343
| ||||| ||||| |||||||| |||||||||||||||||||||||||||||||| |
Sbjct: 323 ggctgaagcctgtcactggcgttagtagggtcacaatcaagagaacaaaaaatatacttt 382
Query: 344 nnnncatctcaaaacctgatgtcttcaagagtccaaattccgagacctacgtcatattcg 403
||||||||||||||||||||| |||||||| ||||| ||||| || ||||||||||
Sbjct: 383 ttttcatctcaaaacctgatgtctttaagagtccgaattctgagacatatgtcatattcg 442
Query: 404 ggg 406
|||
Sbjct: 443 ggg 445
>gnl|LJGI|TC63977 similar to UniRef100_Q2HUT9 Cluster: Nascent polypeptide-associated
complex NAC; UBA-like; n=1; Medicago truncatula|Rep:
Nascent polypeptide-associated complex NAC; UBA-like -
Medicago truncatula (Barrel medic), complete
Length = 1030
Score = 52.0 bits (26), Expect = 3e-06
Identities = 65/78 (83%)
Strand = Plus / Plus
Query: 232 tcaaagcaaagcagaagtgagaagaagagtcgaaaagcaatgttgaagcttggactgaaa 291
|||||||| | |||||| || ||||||||||| || |||||| | || |||||| |||||
Sbjct: 241 tcaaagcagaccagaagcgaaaagaagagtcgcaaggcaatgcttaaacttggaatgaaa 300
Query: 292 cctgtgactggcgtcagt 309
||||| || || ||||||
Sbjct: 301 cctgttacaggtgtcagt 318
>gnl|LJGI|TC57644 similar to UniRef100_Q2HUT9 Cluster: Nascent polypeptide-associated
complex NAC; UBA-like; n=1; Medicago truncatula|Rep:
Nascent polypeptide-associated complex NAC; UBA-like -
Medicago truncatula (Barrel medic), partial (98%)
Length = 915
Score = 52.0 bits (26), Expect = 3e-06
Identities = 56/66 (84%)
Strand = Plus / Plus
Query: 244 agaagtgagaagaagagtcgaaaagcaatgttgaagcttggactgaaacctgtgactggc 303
|||||||| ||||||||||| || |||||| | || |||||| |||||||||| || ||
Sbjct: 229 agaagtgaaaagaagagtcgcaaggcaatgctcaaacttggaatgaaacctgtcacaggt 288
Query: 304 gtcagt 309
||||||
Sbjct: 289 gtcagt 294
>gnl|LJGI|TC57449 similar to UniRef100_Q2HUT9 Cluster: Nascent polypeptide-associated
complex NAC; UBA-like; n=1; Medicago truncatula|Rep:
Nascent polypeptide-associated complex NAC; UBA-like -
Medicago truncatula (Barrel medic), complete
Length = 1095
Score = 52.0 bits (26), Expect = 3e-06
Identities = 65/78 (83%)
Strand = Plus / Plus
Query: 232 tcaaagcaaagcagaagtgagaagaagagtcgaaaagcaatgttgaagcttggactgaaa 291
|||||||| | |||||| || ||||||||||| || |||||| | || |||||| |||||
Sbjct: 241 tcaaagcagaccagaagcgaaaagaagagtcgcaaggcaatgcttaaacttggaatgaaa 300
Query: 292 cctgtgactggcgtcagt 309
||||| || || ||||||
Sbjct: 301 cctgttacaggtgtcagt 318