Miyakogusa Predicted Gene
- Lj1g3v1079500.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj1g3v1079500.1 Non Chatacterized Hit- tr|E1ZE57|E1ZE57_CHLVA
Putative uncharacterized protein OS=Chlorella
variabil,35.44,2e-17,seg,NULL,CUFF.26770.1
(900 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC69046 similar to UniRef100_A7QEV1 Cluster: Chromosome... 640 0.0
gnl|LJGI|TC80775 similar to UniRef100_A7QEV1 Cluster: Chromosome... 539 e-152
gnl|LJGI|AV767936 weakly similar to UniRef100_A7QEV1 Cluster: Ch... 468 e-131
>gnl|LJGI|TC69046 similar to UniRef100_A7QEV1 Cluster: Chromosome chr16 scaffold_86,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr16 scaffold_86, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (39%)
Length = 1382
Score = 640 bits (323), Expect = 0.0
Identities = 429/464 (92%), Gaps = 9/464 (1%)
Strand = Plus / Plus
Query: 169 aaccgtcgccgtttcctcaaaatccccgccatgtcccactccaccacgtcatcttcgcca 228
|||| |||||| ||||||||||||||||||||||| |||||| |||||||||| ||||||
Sbjct: 358 aaccctcgccggttcctcaaaatccccgccatgtctcactccgccacgtcatcatcgcca 417
Query: 229 ccaaacccttc------aaacaacaacctcctcagcagcctcaacccccgccacagcttc 282
|||||||| | ||| | ||||||||||||| ||||||| |||||||||||||
Sbjct: 418 ccaaaccccaccaccgcaaaaaccaacctcctcagc---ctcaaccgccgccacagcttc 474
Query: 283 gcgtccccgcagtccctctccgactggctcaaaccgcggttacccactgattccttcgcg 342
||||||||||||| ||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 475 gcgtccccgcagtgcctctccgactggctcaaaccgcggttaccctctgattccttcgcc 534
Query: 343 acatggggcgtcaagcccggcaccaagaacgtccacaacctctggctcgagatcgccgag 402
|||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 535 acatggggcgtcaagcccggcaccaagaacgtgcacaacctctggctcgagatcgccgag 594
Query: 403 ggcgaaacctcactcgaagactccaccccgccgatccgaaccgttcaggtcgtcacggtt 462
||||||||||| |||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 595 ggcgaaacctccctcgaagactccaccccgccgatccgaaccgtgcaggtcgtcacggtt 654
Query: 463 cgggtcaccggaaaggatgggaagttcctggtggagtctcaccaagaattgtcagacggg 522
|| |||||||| ||||| |||||||||||||||||||||||||| || ||||| ||||||
Sbjct: 655 cgtgtcaccgggaaggacgggaagttcctggtggagtctcaccaggagttgtcggacggg 714
Query: 523 aacgtgaggaaacgtggcagacccttgtcggagaagatgaagcccaacgaggaccctgaa 582
||||||||||| || || ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 715 aacgtgaggaagcgggggagacccttgtcggagaagatgaagcccaacgaggaccctgaa 774
Query: 583 tccgccgccgtgagggccatcagggaagagcttggctccctgat 626
||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 775 tccgccgccgtgagggccatcagggaagagcttgggtccctgat 818
Score = 333 bits (168), Expect = 1e-90
Identities = 219/236 (92%)
Strand = Plus / Plus
Query: 652 gtgacgattgatccgaattcgtatgagatgagggaggaggagcggtgttcgggttcgtac 711
||||||||||| |||||||||||||||||||||| |||||| |||||||| || ||||||
Sbjct: 868 gtgacgattgacccgaattcgtatgagatgagggtggaggaacggtgttccggctcgtac 927
Query: 712 ccgggcttgccaggttgctatgttctgcacacgttgaacgccaccgtggagggtttgccg 771
||||| ||||| |||||||| ||||||||||||||||| ||||| |||||||||||||||
Sbjct: 928 ccgggtttgcccggttgctacgttctgcacacgttgaatgccacggtggagggtttgccg 987
Query: 772 gagggtgatttttgcacctatgagcatgatgagtactcttgtttggatgacaagaaagtg 831
||||||||||||||||||||||||| ||||||||||||| |||| ||||||||||||||
Sbjct: 988 gagggtgatttttgcacctatgagcttgatgagtactctggttttgatgacaagaaagtt 1047
Query: 832 gcaaaccaggctgtgggtgtcaggaaacatcattggacatgggttagtgctgattc 887
||||||||||||||| ||||||||||||| |||||||||||||||||||||||||
Sbjct: 1048 gcaaaccaggctgtgtatgtcaggaaacattattggacatgggttagtgctgattc 1103
Score = 109 bits (55), Expect = 3e-23
Identities = 96/109 (88%), Gaps = 3/109 (2%)
Strand = Plus / Plus
Query: 1 atgtccccgccgctcccaccgccactaa---ccaaccgtctcttagggcagcccatcacc 57
||||||||||||| ||||||||||||| |||||| ||| |||| ||||||||||||
Sbjct: 187 atgtccccgccgccgccaccgccactaataaccaaccacctcctaggacagcccatcacc 246
Query: 58 aaccttccctccttaccggatctctacctcaccaccctctccgtctgct 106
||||| ||||||||||| ||||||| ||||||| |||||||||||||||
Sbjct: 247 aacctcccctccttacctgatctcttcctcaccgccctctccgtctgct 295
>gnl|LJGI|TC80775 similar to UniRef100_A7QEV1 Cluster: Chromosome chr16 scaffold_86,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr16 scaffold_86, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (17%)
Length = 463
Score = 539 bits (272), Expect = e-152
Identities = 272/272 (100%)
Strand = Plus / Plus
Query: 169 aaccgtcgccgtttcctcaaaatccccgccatgtcccactccaccacgtcatcttcgcca 228
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 192 aaccgtcgccgtttcctcaaaatccccgccatgtcccactccaccacgtcatcttcgcca 251
Query: 229 ccaaacccttcaaacaacaacctcctcagcagcctcaacccccgccacagcttcgcgtcc 288
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 252 ccaaacccttcaaacaacaacctcctcagcagcctcaacccccgccacagcttcgcgtcc 311
Query: 289 ccgcagtccctctccgactggctcaaaccgcggttacccactgattccttcgcgacatgg 348
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 312 ccgcagtccctctccgactggctcaaaccgcggttacccactgattccttcgcgacatgg 371
Query: 349 ggcgtcaagcccggcaccaagaacgtccacaacctctggctcgagatcgccgagggcgaa 408
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 372 ggcgtcaagcccggcaccaagaacgtccacaacctctggctcgagatcgccgagggcgaa 431
Query: 409 acctcactcgaagactccaccccgccgatccg 440
||||||||||||||||||||||||||||||||
Sbjct: 432 acctcactcgaagactccaccccgccgatccg 463
Score = 210 bits (106), Expect = 1e-53
Identities = 106/106 (100%)
Strand = Plus / Plus
Query: 1 atgtccccgccgctcccaccgccactaaccaaccgtctcttagggcagcccatcaccaac 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 24 atgtccccgccgctcccaccgccactaaccaaccgtctcttagggcagcccatcaccaac 83
Query: 61 cttccctccttaccggatctctacctcaccaccctctccgtctgct 106
||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 84 cttccctccttaccggatctctacctcaccaccctctccgtctgct 129
>gnl|LJGI|AV767936 weakly similar to UniRef100_A7QEV1 Cluster: Chromosome chr16
scaffold_86, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome chr16 scaffold_86, whole genome
shotgun sequence - Vitis vinifera (Grape), partial (10%)
Length = 514
Score = 468 bits (236), Expect = e-131
Identities = 236/236 (100%)
Strand = Plus / Minus
Query: 665 cgaattcgtatgagatgagggaggaggagcggtgttcgggttcgtacccgggcttgccag 724
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 514 cgaattcgtatgagatgagggaggaggagcggtgttcgggttcgtacccgggcttgccag 455
Query: 725 gttgctatgttctgcacacgttgaacgccaccgtggagggtttgccggagggtgattttt 784
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 454 gttgctatgttctgcacacgttgaacgccaccgtggagggtttgccggagggtgattttt 395
Query: 785 gcacctatgagcatgatgagtactcttgtttggatgacaagaaagtggcaaaccaggctg 844
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 394 gcacctatgagcatgatgagtactcttgtttggatgacaagaaagtggcaaaccaggctg 335
Query: 845 tgggtgtcaggaaacatcattggacatgggttagtgctgattctttggaacattga 900
||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 334 tgggtgtcaggaaacatcattggacatgggttagtgctgattctttggaacattga 279