Miyakogusa Predicted Gene
- Lj1g3v1079140.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj1g3v1079140.1 CUFF.26747.1
(349 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|BW605063 similar to UniRef100_A9V3R5 Cluster: Predicted... 311 2e-84
gnl|LJGI|TC66279 similar to UniRef100_A9VE86 Cluster: Predicted ... 309 6e-84
gnl|LJGI|TC73793 weakly similar to UniRef100_Q4RQ54 Cluster: Chr... 119 1e-26
>gnl|LJGI|BW605063 similar to UniRef100_A9V3R5 Cluster: Predicted protein; n=1;
Monosiga brevicollis MX1|Rep: Predicted protein -
Monosiga brevicollis MX1, partial (16%)
Length = 487
Score = 311 bits (157), Expect = 2e-84
Identities = 172/177 (97%)
Strand = Plus / Plus
Query: 169 gggggaggtcgccgctcaagccgccaccaccgccgggacgtcgtcgtacacgcgagagag 228
|||||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||
Sbjct: 88 gggggaggtcgccgctcaagccgccaccaccgccgggacgccgttgtacacgcgagagag 147
Query: 229 agctttgcaagagggagagagaaatcgcgagggagaaggaaggtgaaggggacttggaca 288
|||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 148 agctttgcgagagggagagagaaatcgcgagggagaaggaaggtgaaggggacttggaca 207
Query: 289 gcaagggattgttcttccaaacttcattctcttctcttttcagatcaagaatcaagg 345
||| | |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 208 gcaggagattgttcttccaaacttcattctcttctcttttcagatcaagaatcaagg 264
Score = 77.8 bits (39), Expect = 4e-14
Identities = 39/39 (100%)
Strand = Plus / Plus
Query: 95 agaacagaaactgcaccccatctcttcacgtgaaaaacc 133
|||||||||||||||||||||||||||||||||||||||
Sbjct: 15 agaacagaaactgcaccccatctcttcacgtgaaaaacc 53
>gnl|LJGI|TC66279 similar to UniRef100_A9VE86 Cluster: Predicted protein; n=1;
Monosiga brevicollis MX1|Rep: Predicted protein -
Monosiga brevicollis MX1, partial (18%)
Length = 598
Score = 309 bits (156), Expect = 6e-84
Identities = 174/180 (96%)
Strand = Plus / Minus
Query: 165 caaggggggaggtcgccgctcaagccgccaccaccgccgggacgtcgtcgtacacgcgag 224
|||||||||||||||||||||||||||||||||||||||||||| ||| |||||||||||
Sbjct: 539 caaggggggaggtcgccgctcaagccgccaccaccgccgggacgccgttgtacacgcgag 480
Query: 225 agagagctttgcaagagggagagagaaatcgcgagggagaaggaaggtgaaggggacttg 284
|||||| ||||| ||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 479 agagagatttgcgagagggagagagaaatcgccagggagaaggaaggtgaaggggacttg 420
Query: 285 gacagcaagggattgttcttccaaacttcattctcttctcttttcagatcaagaatcaag 344
||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 419 gacagcaagagattgttcttccaaacttcattctcttctcttttcagatcaagaatcaag 360
Score = 54.0 bits (27), Expect = 6e-07
Identities = 27/27 (100%)
Strand = Plus / Minus
Query: 107 gcaccccatctcttcacgtgaaaaacc 133
|||||||||||||||||||||||||||
Sbjct: 597 gcaccccatctcttcacgtgaaaaacc 571
>gnl|LJGI|TC73793 weakly similar to UniRef100_Q4RQ54 Cluster: Chromosome 17
SCAF15006, whole genome shotgun sequence; n=1; Tetraodon
nigroviridis|Rep: Chromosome 17 SCAF15006, whole genome
shotgun sequence - Tetraodon nigroviridis (Green
puffer), partial (3%)
Length = 499
Score = 119 bits (60), Expect = 1e-26
Identities = 82/88 (93%), Gaps = 1/88 (1%)
Strand = Plus / Plus
Query: 253 tcgcgagggagaaggaaggtgaaggggacttggacagcaagggattgttcttccaaactt 312
|||||| |||||||||||||||||| ||| ||||||||||| ||||||||||||||||||
Sbjct: 154 tcgcgaaggagaaggaaggtgaaggagacctggacagcaagagattgttcttccaaactt 213
Query: 313 cattctcttc-tcttttcagatcaagaa 339
|||||||||| |||||||||| ||||||
Sbjct: 214 cattctcttcttcttttcagaccaagaa 241