Miyakogusa Predicted Gene
- Lj1g3v1076690.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj1g3v1076690.1 Non Chatacterized Hit- tr|I1JYH9|I1JYH9_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.42283
PE,76.9,0,seg,NULL; CheY-like,CheY-like superfamily; CCT,CCT domain;
Response_reg,Signal transduction response,CUFF.26716.1
(2055 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC69212 similar to UniRef100_Q6LA42 Cluster: Two-compon... 76 1e-12
gnl|LJGI|TC59681 similar to UniRef100_Q6LA42 Cluster: Two-compon... 76 1e-12
gnl|LJGI|TC72678 similar to UniRef100_A7NZB2 Cluster: Chromosome... 62 1e-08
gnl|LJGI|AV415674 similar to UniRef100_A7NZB2 Cluster: Chromosom... 54 4e-06
gnl|LJGI|TC74379 similar to UniRef100_Q93WK5 Cluster: Two-compon... 54 4e-06
>gnl|LJGI|TC69212 similar to UniRef100_Q6LA42 Cluster: Two-component response
regulator-like APRR5; n=1; Arabidopsis thaliana|Rep:
Two-component response regulator-like APRR5 -
Arabidopsis thaliana (Mouse-ear cress), partial (24%)
Length = 772
Score = 75.8 bits (38), Expect = 1e-12
Identities = 119/146 (81%)
Strand = Plus / Plus
Query: 358 tgcaaaaacatccctgtcataatgatgtcctcacaagattcagttagcacggtatataaa 417
|||||| |||| ||||||||||||||||| || | || |||||||||| ||| | |||
Sbjct: 424 tgcaaacacattcctgtcataatgatgtcatctaatgactcagttagcatggtcttcaaa 483
Query: 418 tgcatgttgagaggtgctgctgactatcttgttaagccccttagaaagaatgagctgagg 477
|||||||| | |||||| ||||| | |||| | || || | || | ||||||||| |||
Sbjct: 484 tgcatgttaaaaggtgcagctgattttcttatcaaacctgtaaggaggaatgagctcagg 543
Query: 478 aatttgtggcagcatgtttggagaag 503
|| |||||||||||||| ||||||||
Sbjct: 544 aacttgtggcagcatgtctggagaag 569
>gnl|LJGI|TC59681 similar to UniRef100_Q6LA42 Cluster: Two-component response
regulator-like APRR5; n=1; Arabidopsis thaliana|Rep:
Two-component response regulator-like APRR5 -
Arabidopsis thaliana (Mouse-ear cress), partial (24%)
Length = 845
Score = 75.8 bits (38), Expect = 1e-12
Identities = 119/146 (81%)
Strand = Plus / Plus
Query: 358 tgcaaaaacatccctgtcataatgatgtcctcacaagattcagttagcacggtatataaa 417
|||||| |||| ||||||||||||||||| || | || |||||||||| ||| | |||
Sbjct: 317 tgcaaacacattcctgtcataatgatgtcatctaatgactcagttagcatggtcttcaaa 376
Query: 418 tgcatgttgagaggtgctgctgactatcttgttaagccccttagaaagaatgagctgagg 477
|||||||| | |||||| ||||| | |||| | || || | || | ||||||||| |||
Sbjct: 377 tgcatgttaaaaggtgcagctgattttcttatcaaacctgtaaggaggaatgagctcagg 436
Query: 478 aatttgtggcagcatgtttggagaag 503
|| |||||||||||||| ||||||||
Sbjct: 437 aacttgtggcagcatgtctggagaag 462
>gnl|LJGI|TC72678 similar to UniRef100_A7NZB2 Cluster: Chromosome chr6 scaffold_3,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr6 scaffold_3, whole genome shotgun sequence
- Vitis vinifera (Grape), partial (9%)
Length = 1292
Score = 61.9 bits (31), Expect = 1e-08
Identities = 52/59 (88%)
Strand = Plus / Plus
Query: 1909 aaagagagatgctatgagaagaaggttcgatatgagagcagaaagaaattagcagagca 1967
||||| ||||||| ||||||||||||||||||| | |||||||| ||| | ||||||||
Sbjct: 635 aaagaaagatgctttgagaagaaggttcgatatcacagcagaaaaaaactggcagagca 693
>gnl|LJGI|AV415674 similar to UniRef100_A7NZB2 Cluster: Chromosome chr6 scaffold_3,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr6 scaffold_3, whole genome shotgun sequence
- Vitis vinifera (Grape), partial (7%)
Length = 319
Score = 54.0 bits (27), Expect = 4e-06
Identities = 51/59 (86%)
Strand = Plus / Plus
Query: 1909 aaagagagatgctatgagaagaaggttcgatatgagagcagaaagaaattagcagagca 1967
||||| ||||||| |||||| |||||||||||| | |||||||| ||| | ||||||||
Sbjct: 167 aaagaaagatgctttgagaataaggttcgatatcacagcagaaaaaaactggcagagca 225
>gnl|LJGI|TC74379 similar to UniRef100_Q93WK5 Cluster: Two-component response
regulator-like APRR7; n=1; Arabidopsis thaliana|Rep:
Two-component response regulator-like APRR7 - Arabidopsis
thaliana (Mouse-ear cress), partial (9%)
Length = 496
Score = 54.0 bits (27), Expect = 4e-06
Identities = 51/59 (86%)
Strand = Plus / Plus
Query: 1912 gagagatgctatgagaagaaggttcgatatgagagcagaaagaaattagcagagcaacg 1970
|||||||||| | | || |||||||||||| |||||||||||| |||||| || |||||
Sbjct: 150 gagagatgctttcataaaaaggttcgatatcagagcagaaagagattagctgaacaacg 208