Miyakogusa Predicted Gene

Lj1g3v1074620.3

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj1g3v1074620.3 tr|Q7V2R9|Q7V2R9_PROMP Light repressed protein A
homolog OS=Prochlorococcus marinus subsp. pastoris ,39.76,3e-19,no
description,Ribosomal protein S30Ae/sigma 54 modulation protein;
Ribosome binding protein Y (YfiA,CUFF.26709.3
         (606 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|TC72805 similar to UniRef100_A7QEV5 Cluster: Chromosome...   989   0.0  
gnl|LJGI|AV777392 similar to UniRef100_A7QEV5 Cluster: Chromosom...   295   2e-79

>gnl|LJGI|TC72805 similar to UniRef100_A7QEV5 Cluster: Chromosome chr16 scaffold_86,
           whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
           Chromosome chr16 scaffold_86, whole genome shotgun
           sequence - Vitis vinifera (Grape), partial (90%)
          Length = 1356

 Score =  989 bits (499), Expect = 0.0
 Identities = 499/499 (100%)
 Strand = Plus / Plus

                                                                       
Query: 108 gaagcacagccacatagtcagagagattgatgtcaggctttctactcgaggtggaggaga 167
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 491 gaagcacagccacatagtcagagagattgatgtcaggctttctactcgaggtggaggaga 550

                                                                       
Query: 168 gtttgggcgaggacccagaactagtagatgtgaggtgactttgtttaccaagaggcatgg 227
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 551 gtttgggcgaggacccagaactagtagatgtgaggtgactttgtttaccaagaggcatgg 610

                                                                       
Query: 228 cgtcgtgcgggctgaggaggattctgaaactacctatgcaagtatagatttggtgtcgtc 287
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 611 cgtcgtgcgggctgaggaggattctgaaactacctatgcaagtatagatttggtgtcgtc 670

                                                                       
Query: 288 catcattcagagaaagctgaggaagatcaaggaaaaagtgtctgatcacggtcgccacat 347
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 671 catcattcagagaaagctgaggaagatcaaggaaaaagtgtctgatcacggtcgccacat 730

                                                                       
Query: 348 gaaagggttcaatagggcgaaggttagggagccggtagaagtggaagtgcccttggagga 407
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 731 gaaagggttcaatagggcgaaggttagggagccggtagaagtggaagtgcccttggagga 790

                                                                       
Query: 408 ggatgatgatatatccccactggaagaggagggagaagcaactttggtcgaggttgttcg 467
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 791 ggatgatgatatatccccactggaagaggagggagaagcaactttggtcgaggttgttcg 850

                                                                       
Query: 468 gacaaagtactttgacatgccaccattaactgtgtctgaagcaattgagcagcttgtaaa 527
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 851 gacaaagtactttgacatgccaccattaactgtgtctgaagcaattgagcagcttgtaaa 910

                                                                       
Query: 528 tgttgatcatgccttttatgctttccgaaatgaagaaactggggagattaatattgtata 587
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 911 tgttgatcatgccttttatgctttccgaaatgaagaaactggggagattaatattgtata 970

                              
Query: 588 caaaagaaaagaaggaggt 606
           |||||||||||||||||||
Sbjct: 971 caaaagaaaagaaggaggt 989



 Score =  214 bits (108), Expect = 5e-55
 Identities = 108/108 (100%)
 Strand = Plus / Plus

                                                                       
Query: 1   atgctgcaacttctactgtttctgctgctgacaattccacaaacaccttccgtgcagttc 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 316 atgctgcaacttctactgtttctgctgctgacaattccacaaacaccttccgtgcagttc 375

                                                           
Query: 61  gcaattcatgggacggtccactctcctccgtcaaactcatcatccagg 108
           ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 376 gcaattcatgggacggtccactctcctccgtcaaactcatcatccagg 423


>gnl|LJGI|AV777392 similar to UniRef100_A7QEV5 Cluster: Chromosome chr16 scaffold_86,
           whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
           Chromosome chr16 scaffold_86, whole genome shotgun
           sequence - Vitis vinifera (Grape), partial (34%)
          Length = 572

 Score =  295 bits (149), Expect = 2e-79
 Identities = 149/149 (100%)
 Strand = Plus / Minus

                                                                       
Query: 458 aggttgttcggacaaagtactttgacatgccaccattaactgtgtctgaagcaattgagc 517
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 480 aggttgttcggacaaagtactttgacatgccaccattaactgtgtctgaagcaattgagc 421

                                                                       
Query: 518 agcttgtaaatgttgatcatgccttttatgctttccgaaatgaagaaactggggagatta 577
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 420 agcttgtaaatgttgatcatgccttttatgctttccgaaatgaagaaactggggagatta 361

                                        
Query: 578 atattgtatacaaaagaaaagaaggaggt 606
           |||||||||||||||||||||||||||||
Sbjct: 360 atattgtatacaaaagaaaagaaggaggt 332