Miyakogusa Predicted Gene

Lj1g3v1074620.2

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj1g3v1074620.2 tr|C1EFG3|C1EFG3_MICSR Predicted protein
OS=Micromonas sp. (strain RCC299 / NOUM17)
GN=MICPUN_109404,46.67,1e-18,no description,Ribosomal protein
S30Ae/sigma 54 modulation protein; Ribosome binding protein Y
(YfiA,CUFF.26709.2
         (552 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|TC72805 similar to UniRef100_A7QEV5 Cluster: Chromosome...  1074   0.0  

>gnl|LJGI|TC72805 similar to UniRef100_A7QEV5 Cluster: Chromosome chr16 scaffold_86,
           whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
           Chromosome chr16 scaffold_86, whole genome shotgun
           sequence - Vitis vinifera (Grape), partial (90%)
          Length = 1356

 Score = 1074 bits (542), Expect = 0.0
 Identities = 542/542 (100%)
 Strand = Plus / Plus

                                                                       
Query: 1   atggccgccgccactactcccttgaacttccacttcccctcaccatcaccctcatctcac 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 180 atggccgccgccactactcccttgaacttccacttcccctcaccatcaccctcatctcac 239

                                                                       
Query: 61  acttcctctacacactctgcactttctctccctcccttctccctaacctcaacattctgg 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 240 acttcctctacacactctgcactttctctccctcccttctccctaacctcaacattctgg 299

                                                                       
Query: 121 gggttcaaactcaagcatgctgcaacttctactgtttctgctgctgacaattccacaaac 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 300 gggttcaaactcaagcatgctgcaacttctactgtttctgctgctgacaattccacaaac 359

                                                                       
Query: 181 accttccgtgcagttcgcaattcatgggacggtccactctcctccgtcaaactcatcatc 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 360 accttccgtgcagttcgcaattcatgggacggtccactctcctccgtcaaactcatcatc 419

                                                                       
Query: 241 cagggcaagaatctcgacctcaccgacgctgtcaagcagcacgtggaggacaaggtgggg 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 420 cagggcaagaatctcgacctcaccgacgctgtcaagcagcacgtggaggacaaggtgggg 479

                                                                       
Query: 301 aaagccgttcagaagcacagccacatagtcagagagattgatgtcaggctttctactcga 360
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 480 aaagccgttcagaagcacagccacatagtcagagagattgatgtcaggctttctactcga 539

                                                                       
Query: 361 ggtggaggagagtttgggcgaggacccagaactagtagatgtgaggtgactttgtttacc 420
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 540 ggtggaggagagtttgggcgaggacccagaactagtagatgtgaggtgactttgtttacc 599

                                                                       
Query: 421 aagaggcatggcgtcgtgcgggctgaggaggattctgaaactacctatgcaagtatagat 480
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 600 aagaggcatggcgtcgtgcgggctgaggaggattctgaaactacctatgcaagtatagat 659

                                                                       
Query: 481 ttggtgtcgtccatcattcagagaaagctgaggaagatcaaggaaaaagtgtctgatcac 540
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 660 ttggtgtcgtccatcattcagagaaagctgaggaagatcaaggaaaaagtgtctgatcac 719

             
Query: 541 gg 542
           ||
Sbjct: 720 gg 721