Miyakogusa Predicted Gene
- Lj1g3v1033250.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj1g3v1033250.1 Non Chatacterized Hit- tr|I1KAY2|I1KAY2_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.54289 PE,92.86,0,no
description,NULL; Domain in Tre-2, BUB2p, and Cdc16p.
Probable,Rab-GTPase-TBC domain; GTPASE ACTI,CUFF.26680.1
(844 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC64416 similar to UniRef100_A7QEY2 Cluster: Chromosome... 581 e-165
gnl|LJGI|TC75257 similar to UniRef100_A7QEY2 Cluster: Chromosome... 490 e-138
>gnl|LJGI|TC64416 similar to UniRef100_A7QEY2 Cluster: Chromosome chr16 scaffold_86,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr16 scaffold_86, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (17%)
Length = 1022
Score = 581 bits (293), Expect = e-165
Identities = 293/293 (100%)
Strand = Plus / Plus
Query: 552 ttgggaagtaatgtgggcagatcaagcagcaataagggcaggtattggaaaatcagcatg 611
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 ttgggaagtaatgtgggcagatcaagcagcaataagggcaggtattggaaaatcagcatg 60
Query: 612 gagcagaatcaggcagcgcgccccgccaacagatgatttgttgctttttgcaatagcagc 671
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 gagcagaatcaggcagcgcgccccgccaacagatgatttgttgctttttgcaatagcagc 120
Query: 672 ttcagtgttacagaggaggaaattgatcattgagaagtactgtagcatggatgagatcat 731
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 ttcagtgttacagaggaggaaattgatcattgagaagtactgtagcatggatgagatcat 180
Query: 732 taaggaatgcaatggcatggcaggacatcttgatgtttggaagctgctggatgatgccca 791
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 taaggaatgcaatggcatggcaggacatcttgatgtttggaagctgctggatgatgccca 240
Query: 792 taacttggtggtcacccttcatgacaaaatgaaaatagaggcatcattctgat 844
|||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 taacttggtggtcacccttcatgacaaaatgaaaatagaggcatcattctgat 293
>gnl|LJGI|TC75257 similar to UniRef100_A7QEY2 Cluster: Chromosome chr16 scaffold_86,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr16 scaffold_86, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (45%)
Length = 1614
Score = 490 bits (247), Expect = e-138
Identities = 260/263 (98%), Gaps = 1/263 (0%)
Strand = Plus / Plus
Query: 1 atgaaagtcccatccaaactacgaactaatgaagacttcgccacatggcaacggatcat- 59
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1352 atgaaagtcccatccaaactacgaactaatgaagacttcgccacatggcaacggatcatg 1411
Query: 60 ccggcttgatgcagtacgtgccaatgcagaatggatgtcgtacaatcccacccaagctgt 119
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1412 ccggcttgatgcagtacgtgccaatgcagaatggatgtcgtacaatcccacccaagctgt 1471
Query: 120 tgtaccggagagtagggcacgtcgttcagctgaggctgttggcttgaaggattatggtca 179
||||||||||||||||||||||||||||||||||||| ||||||||||||| ||||||||
Sbjct: 1472 tgtaccggagagtagggcacgtcgttcagctgaggctattggcttgaaggactatggtca 1531
Query: 180 cctagaacctggcagaatctttcatgctgctcgactagttgctatccttgaagcatatgc 239
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1532 cctagaacctggcagaatctttcatgctgctcgactagttgctatccttgaagcatatgc 1591
Query: 240 actgtacgaccctgaaattggct 262
|||||||||||||||||||||||
Sbjct: 1592 actgtacgaccctgaaattggct 1614